Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO3Q8TAP4 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO3Q8TAP4 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LMO3Q8TAP4 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO3Q8TAP4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO3Q8TAP4 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LMO3Q8TAP4 AC025538.1-201ENST00000510707 1486 ntBASIC13.93□□□□□ -0.18
LMO3Q8TAP4 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 MIR1301-201ENST00000408518 82 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 RN7SL288P-201ENST00000490496 291 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 HNRNPA1P4-201ENST00000509706 756 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AC106047.2-201ENST00000511723 743 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AC055811.3-201ENST00000584952 686 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AL359510.2-201ENST00000624958 2249 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FAM90A21P-201ENST00000510875 1396 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FAM90A15P-201ENST00000514465 1395 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FAM90A6P-201ENST00000515148 1394 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FAM90A16P-201ENST00000526662 1395 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FAM90A9P-201ENST00000527940 1395 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FAM90A5P-201ENST00000528738 1395 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FAM90A14P-201ENST00000530386 1395 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 FAM90A13P-201ENST00000534703 1395 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AC080013.1-204ENST00000607426 2185 ntBASIC13.92□□□□□ -0.18
LMO3Q8TAP4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO3Q8TAP4 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 AC020931.1-201ENST00000589622 1346 ntBASIC13.91□□□□□ -0.18
LMO3Q8TAP4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 MARCKSL1P2-201ENST00000401037 976 ntBASIC13.91□□□□□ -0.18
LMO3Q8TAP4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 AL627389.1-201ENST00000413508 1182 ntBASIC13.91□□□□□ -0.18
LMO3Q8TAP4 KRT18P39-201ENST00000415349 1299 ntBASIC13.91□□□□□ -0.18
LMO3Q8TAP4 GAPDHP67-201ENST00000422905 788 ntBASIC13.91□□□□□ -0.18
LMO3Q8TAP4 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 MIR4746-201ENST00000579802 71 ntBASIC13.91□□□□□ -0.18
LMO3Q8TAP4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 AC008622.3-201ENST00000621170 600 ntBASIC13.91□□□□□ -0.18
LMO3Q8TAP4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO3Q8TAP4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms