Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04436 AC104758.3-203ENST00000562938 2123 ntBASIC12.01□□□□□ -0.49
P04436 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.01□□□□□ -0.49
P04436 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04436 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04436 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04436 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04436 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12□□□□□ -0.49
P04436 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12□□□□□ -0.49
P04436 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
P04436 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12□□□□□ -0.49
P04436 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
P04436 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12□□□□□ -0.49
P04436 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12□□□□□ -0.49
P04436 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12□□□□□ -0.49
P04436 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
P04436 AC005822.1-201ENST00000414124 1034 ntBASIC12□□□□□ -0.49
P04436 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12□□□□□ -0.49
P04436 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC12□□□□□ -0.49
P04436 RPS15P5-201ENST00000449885 432 ntBASIC12□□□□□ -0.49
P04436 PSME2P2-201ENST00000453033 700 ntBASIC12□□□□□ -0.49
P04436 RPS18P9-201ENST00000482817 460 ntBASIC12□□□□□ -0.49
P04436 BCRP4-201ENST00000506079 804 ntBASIC12□□□□□ -0.49
P04436 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC12□□□□□ -0.49
P04436 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC12□□□□□ -0.49
P04436 MIR4254-201ENST00000581063 76 ntBASIC12□□□□□ -0.49
P04436 METTL23-211ENST00000589977 617 ntTSL 3 BASIC12□□□□□ -0.49
P04436 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 AC080013.5-201ENST00000607044 679 ntBASIC12□□□□□ -0.49
P04436 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P04436 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 ANKRD20A7P-201ENST00000402318 2414 ntBASIC12□□□□□ -0.49
P04436 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04436 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
P04436 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12□□□□□ -0.49
P04436 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC12□□□□□ -0.49
P04436 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04436 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.99□□□□□ -0.49
P04436 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 TEF-202ENST00000406644 4386 ntTSL 2 BASIC11.99□□□□□ -0.49
P04436 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.99□□□□□ -0.49
P04436 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.99□□□□□ -0.49
P04436 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
P04436 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
P04436 SNORA30.1-201ENST00000363193 129 ntBASIC11.99□□□□□ -0.49
P04436 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 SNORD88B-201ENST00000408454 91 ntBASIC11.99□□□□□ -0.49
P04436 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC11.99□□□□□ -0.49
P04436 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC11.99□□□□□ -0.49
P04436 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04436 AL356000.1-201ENST00000441073 1238 ntBASIC11.99□□□□□ -0.49
P04436 RN7SL789P-201ENST00000478944 293 ntBASIC11.99□□□□□ -0.49
P04436 AC099328.1-201ENST00000498809 1030 ntBASIC11.99□□□□□ -0.49
P04436 AC092612.1-201ENST00000514501 998 ntBASIC11.99□□□□□ -0.49
P04436 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC11.99□□□□□ -0.49
P04436 AC004923.3-201ENST00000527532 355 ntBASIC11.99□□□□□ -0.49
P04436 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
P04436 AC063924.1-201ENST00000546680 673 ntBASIC11.99□□□□□ -0.49
P04436 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
P04436 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC11.99□□□□□ -0.49
P04436 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC11.99□□□□□ -0.49
P04436 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC11.99□□□□□ -0.49
P04436 RN7SL480P-201ENST00000581481 294 ntBASIC11.99□□□□□ -0.49
P04436 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
P04436 ACTBP9-201ENST00000587663 1099 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms