Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC14.05□□□□□ -0.16
O00370 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
O00370 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC14.05□□□□□ -0.16
O00370 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
O00370 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
O00370 AC022400.8-201ENST00000623453 3599 ntBASIC14.04□□□□□ -0.16
O00370 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 AC008806.1-201ENST00000624962 2443 ntBASIC14.04□□□□□ -0.16
O00370 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
O00370 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC14.04□□□□□ -0.16
O00370 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
O00370 AC010086.2-201ENST00000428616 226 ntBASIC14.04□□□□□ -0.16
O00370 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.04□□□□□ -0.16
O00370 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 RNA5SP420-201ENST00000516997 137 ntBASIC14.04□□□□□ -0.16
O00370 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 FAM86B3P-203ENST00000523992 854 ntBASIC14.04□□□□□ -0.16
O00370 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.04□□□□□ -0.16
O00370 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
O00370 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.04□□□□□ -0.16
O00370 CYP4F36P-201ENST00000589193 186 ntBASIC14.04□□□□□ -0.16
O00370 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.04□□□□□ -0.16
O00370 AC127024.7-201ENST00000625101 200 ntBASIC14.04□□□□□ -0.16
O00370 AP000769.1-203ENST00000637245 208 ntBASIC14.04□□□□□ -0.16
O00370 AC002472.4-201ENST00000641915 272 ntBASIC14.04□□□□□ -0.16
O00370 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
O00370 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
O00370 AL606760.3-201ENST00000569869 3591 ntBASIC14.04□□□□□ -0.16
O00370 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 STRCP1-201ENST00000509801 5328 ntBASIC14.04□□□□□ -0.16
O00370 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
O00370 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
O00370 PABPC1P2-201ENST00000471997 1805 ntBASIC14.04□□□□□ -0.16
O00370 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.03□□□□□ -0.16
O00370 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
O00370 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC14.03□□□□□ -0.16
O00370 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
O00370 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.03□□□□□ -0.16
O00370 AL627389.1-201ENST00000413508 1182 ntBASIC14.03□□□□□ -0.16
O00370 PHBP10-201ENST00000416467 784 ntBASIC14.03□□□□□ -0.16
O00370 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.03□□□□□ -0.16
O00370 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.03□□□□□ -0.16
O00370 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
O00370 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC14.03□□□□□ -0.16
O00370 OR4A49P-201ENST00000527050 632 ntBASIC14.03□□□□□ -0.16
O00370 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC14.03□□□□□ -0.16
O00370 PHBP18-201ENST00000546648 813 ntBASIC14.03□□□□□ -0.16
O00370 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC14.03□□□□□ -0.16
O00370 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.03□□□□□ -0.16
O00370 ACTBP9-201ENST00000587663 1099 ntBASIC14.03□□□□□ -0.16
O00370 AC010632.2-201ENST00000588369 1224 ntBASIC14.03□□□□□ -0.16
O00370 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms