Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.16□□□□□ -0.14
SSR1P43307 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 GULOP-201ENST00000454030 748 ntBASIC14.16□□□□□ -0.14
SSR1P43307 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 EEF1GP8-201ENST00000506566 1154 ntBASIC14.16□□□□□ -0.14
SSR1P43307 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 AC134698.3-201ENST00000523880 214 ntBASIC14.16□□□□□ -0.14
SSR1P43307 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.16□□□□□ -0.14
SSR1P43307 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 VENTXP3-201ENST00000546480 773 ntBASIC14.16□□□□□ -0.14
SSR1P43307 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.16□□□□□ -0.14
SSR1P43307 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.16□□□□□ -0.14
SSR1P43307 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.16□□□□□ -0.14
SSR1P43307 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.16□□□□□ -0.14
SSR1P43307 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 AP000322.3-201ENST00000608665 388 ntBASIC14.16□□□□□ -0.14
SSR1P43307 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 AL139099.5-201ENST00000635274 300 ntBASIC14.16□□□□□ -0.14
SSR1P43307 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SSR1P43307 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SSR1P43307 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSR1P43307 AC091807.1-201ENST00000418838 1544 ntBASIC14.15□□□□□ -0.14
SSR1P43307 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.15□□□□□ -0.14
SSR1P43307 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC14.15□□□□□ -0.14
SSR1P43307 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC14.15□□□□□ -0.14
SSR1P43307 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.15□□□□□ -0.14
SSR1P43307 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC14.15□□□□□ -0.14
SSR1P43307 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SSR1P43307 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SSR1P43307 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SSR1P43307 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.15□□□□□ -0.14
SSR1P43307 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SSR1P43307 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.15□□□□□ -0.14
SSR1P43307 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.15□□□□□ -0.14
SSR1P43307 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.15□□□□□ -0.14
SSR1P43307 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.15□□□□□ -0.14
SSR1P43307 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.15□□□□□ -0.14
SSR1P43307 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SSR1P43307 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
SSR1P43307 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC14.15□□□□□ -0.14
SSR1P43307 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSR1P43307 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SSR1P43307 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.15□□□□□ -0.14
SSR1P43307 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.15□□□□□ -0.15
SSR1P43307 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SSR1P43307 AC139491.6-202ENST00000637171 2077 ntBASIC14.14□□□□□ -0.15
SSR1P43307 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC14.14□□□□□ -0.15
SSR1P43307 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SSR1P43307 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSR1P43307 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSR1P43307 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.14□□□□□ -0.15
SSR1P43307 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSR1P43307 CSPG4P13-202ENST00000567704 4801 ntBASIC14.14□□□□□ -0.15
SSR1P43307 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSR1P43307 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSR1P43307 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSR1P43307 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC14.14□□□□□ -0.15
SSR1P43307 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms