Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.77□□□□□ -0.21
MTHFRP42898 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 AC124319.4-201ENST00000622931 2161 ntBASIC13.77□□□□□ -0.21
MTHFRP42898 AC020917.4-201ENST00000623994 1999 ntBASIC13.77□□□□□ -0.21
MTHFRP42898 AL139823.1-201ENST00000641871 1225 ntBASIC13.77□□□□□ -0.21
MTHFRP42898 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MTHFRP42898 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
MTHFRP42898 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
MTHFRP42898 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MTHFRP42898 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
MTHFRP42898 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
MTHFRP42898 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 Z97653.2-201ENST00000623057 1418 ntBASIC13.76□□□□□ -0.21
MTHFRP42898 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
MTHFRP42898 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MTHFRP42898 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 AC012066.1-201ENST00000439252 694 ntBASIC13.76□□□□□ -0.21
MTHFRP42898 AC139143.1-201ENST00000441772 1207 ntBASIC13.76□□□□□ -0.21
MTHFRP42898 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC13.76□□□□□ -0.21
MTHFRP42898 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC13.76□□□□□ -0.21
MTHFRP42898 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC13.76□□□□□ -0.21
MTHFRP42898 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC13.76□□□□□ -0.21
MTHFRP42898 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.76□□□□□ -0.21
MTHFRP42898 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC13.76□□□□□ -0.21
MTHFRP42898 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
MTHFRP42898 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.76□□□□□ -0.21
MTHFRP42898 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MTHFRP42898 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MTHFRP42898 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 USP8-219ENST00000625664 1568 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 KRT8P5-201ENST00000592443 1458 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
MTHFRP42898 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
MTHFRP42898 CLK2P1-201ENST00000416636 1294 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 AP000346.2-202ENST00000425948 383 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 HNRNPA1P73-201ENST00000446472 928 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC13.75□□□□□ -0.21
MTHFRP42898 DIS3L2P1-201ENST00000509197 559 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 RAB42P1-201ENST00000555078 316 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC13.75□□□□□ -0.21
MTHFRP42898 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 CYP4F10P-201ENST00000589560 752 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 AC127002.1-201ENST00000619123 455 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC13.75□□□□□ -0.21
MTHFRP42898 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms