Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 AC134698.3-201ENST00000523880 214 ntBASIC12.52□□□□□ -0.41
SCN2BO60939 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 RN7SL357P-201ENST00000581065 298 ntBASIC12.52□□□□□ -0.41
SCN2BO60939 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.52□□□□□ -0.41
SCN2BO60939 AL139823.1-201ENST00000641871 1225 ntBASIC12.52□□□□□ -0.41
SCN2BO60939 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.52□□□□□ -0.41
SCN2BO60939 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SCN2BO60939 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.51□□□□□ -0.41
SCN2BO60939 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.51□□□□□ -0.41
SCN2BO60939 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 AC133919.3-201ENST00000621407 1804 ntBASIC12.51□□□□□ -0.41
SCN2BO60939 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.51□□□□□ -0.41
SCN2BO60939 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SCN2BO60939 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 U3.5-201ENST00000363448 216 ntBASIC12.51□□□□□ -0.41
SCN2BO60939 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SCN2BO60939 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC12.51□□□□□ -0.41
SCN2BO60939 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.51□□□□□ -0.41
SCN2BO60939 AC104212.2-201ENST00000478813 628 ntBASIC12.51□□□□□ -0.41
SCN2BO60939 IMP3P2-201ENST00000489760 475 ntBASIC12.51□□□□□ -0.41
SCN2BO60939 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.51□□□□□ -0.41
SCN2BO60939 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC12.51□□□□□ -0.41
SCN2BO60939 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 AP003108.3-201ENST00000623765 2234 ntBASIC12.51□□□□□ -0.41
SCN2BO60939 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.51□□□□□ -0.41
SCN2BO60939 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SCN2BO60939 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 AC026992.2-203ENST00000563004 2419 ntBASIC12.51□□□□□ -0.41
SCN2BO60939 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.51□□□□□ -0.41
SCN2BO60939 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.51□□□□□ -0.41
SCN2BO60939 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SCN2BO60939 AL365181.1-201ENST00000564032 1828 ntBASIC12.51□□□□□ -0.41
SCN2BO60939 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCN2BO60939 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.51□□□□□ -0.41
SCN2BO60939 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC12.5□□□□□ -0.41
SCN2BO60939 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.5□□□□□ -0.41
SCN2BO60939 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SCN2BO60939 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.5□□□□□ -0.41
SCN2BO60939 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.5□□□□□ -0.41
SCN2BO60939 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.5□□□□□ -0.41
SCN2BO60939 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 AC019193.1-201ENST00000506678 823 ntBASIC12.5□□□□□ -0.41
SCN2BO60939 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.5□□□□□ -0.41
SCN2BO60939 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.5□□□□□ -0.41
SCN2BO60939 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.5□□□□□ -0.41
SCN2BO60939 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms