Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 MIR2278-201ENST00000516344 96 ntBASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 RNA5SP420-201ENST00000516997 137 ntBASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AC023051.2-201ENST00000541141 460 ntBASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AC079414.2-201ENST00000567157 1104 ntBASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 RN7SL162P-201ENST00000579233 292 ntBASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 PLS3-210ENST00000626746 216 ntTSL 4 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AP000437.1-201ENST00000624057 2085 ntBASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AC008038.1-201ENST00000634247 1314 ntBASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NPIPA3F8WFD2 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AC005154.3-201ENST00000419639 1393 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 POM121L4P-202ENST00000427789 1891 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AC012358.2-201ENST00000430010 1434 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 HNRNPA1P58-201ENST00000403629 610 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 SNORA50D-201ENST00000408059 134 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AC092612.1-201ENST00000514501 998 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AC120498.7-201ENST00000562876 330 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 RN7SL524P-201ENST00000581152 300 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 AL627230.2-201ENST00000613254 655 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 SNORA50D-202ENST00000627561 132 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 GBAP1-208ENST00000566701 1546 ntBASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NPIPA3F8WFD2 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 Z97653.2-201ENST00000623057 1418 ntBASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms