Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 MIR1227-201ENST00000408484 88 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 AP001331.1-201ENST00000413008 1015 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.15□□□□□ -0.3
CSNK1DP48730 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 RPS18P9-201ENST00000482817 460 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 MIR2278-201ENST00000516344 96 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 AC104117.1-201ENST00000517817 900 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 AP003170.2-201ENST00000544730 786 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 AC120498.7-201ENST00000562876 330 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 AL139339.2-201ENST00000608063 657 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 AC067852.6-201ENST00000591237 1736 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 AC083964.2-201ENST00000623988 2396 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1DP48730 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1DP48730 AL031719.1-201ENST00000623365 2587 ntBASIC13.15□□□□□ -0.3
CSNK1DP48730 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.15□□□□□ -0.31
CSNK1DP48730 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.15□□□□□ -0.31
CSNK1DP48730 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CSNK1DP48730 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CSNK1DP48730 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1DP48730 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CSNK1DP48730 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 PARK7-204ENST00000377493 795 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1DP48730 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.14□□□□□ -0.31
CSNK1DP48730 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.14□□□□□ -0.31
CSNK1DP48730 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 TULP3P1-202ENST00000453253 1291 ntBASIC13.14□□□□□ -0.31
CSNK1DP48730 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC13.14□□□□□ -0.31
CSNK1DP48730 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1DP48730 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC13.14□□□□□ -0.31
CSNK1DP48730 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC13.14□□□□□ -0.31
CSNK1DP48730 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1DP48730 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.14□□□□□ -0.31
CSNK1DP48730 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CSNK1DP48730 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC13.14□□□□□ -0.31
CSNK1DP48730 AC020904.3-201ENST00000624199 442 ntBASIC13.14□□□□□ -0.31
CSNK1DP48730 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1DP48730 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1DP48730 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms