Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC16.71■□□□□ 0.27
CHL1O00533 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHL1O00533 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
CHL1O00533 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHL1O00533 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC16.7■□□□□ 0.26
CHL1O00533 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 AC008764.8-201ENST00000623966 2717 ntBASIC16.7■□□□□ 0.26
CHL1O00533 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC16.7■□□□□ 0.26
CHL1O00533 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 HNRNPA1P25-201ENST00000422644 937 ntBASIC16.7■□□□□ 0.26
CHL1O00533 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CHL1O00533 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC16.7■□□□□ 0.26
CHL1O00533 AC103724.2-201ENST00000520355 476 ntBASIC16.7■□□□□ 0.26
CHL1O00533 IGHEP1-201ENST00000521393 651 ntBASIC16.7■□□□□ 0.26
CHL1O00533 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC16.7■□□□□ 0.26
CHL1O00533 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC16.7■□□□□ 0.26
CHL1O00533 AP003170.2-201ENST00000544730 786 ntBASIC16.7■□□□□ 0.26
CHL1O00533 AC018868.2-201ENST00000559655 1259 ntBASIC16.7■□□□□ 0.26
CHL1O00533 AC009812.1-201ENST00000605948 1059 ntBASIC16.7■□□□□ 0.26
CHL1O00533 AC087893.1-201ENST00000612818 664 ntBASIC16.7■□□□□ 0.26
CHL1O00533 AC139100.2-201ENST00000616901 662 ntBASIC16.7■□□□□ 0.26
CHL1O00533 AC099795.2-201ENST00000639582 440 ntBASIC16.7■□□□□ 0.26
CHL1O00533 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC16.7■□□□□ 0.26
CHL1O00533 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CHL1O00533 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHL1O00533 MIR600HG-201ENST00000449175 5984 ntBASIC16.7■□□□□ 0.26
CHL1O00533 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC16.69■□□□□ 0.26
CHL1O00533 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC16.69■□□□□ 0.26
CHL1O00533 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC16.69■□□□□ 0.26
CHL1O00533 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC16.69■□□□□ 0.26
CHL1O00533 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC16.69■□□□□ 0.26
CHL1O00533 AKR1C6P-201ENST00000432950 983 ntBASIC16.69■□□□□ 0.26
CHL1O00533 PIEZO1P1-201ENST00000485427 219 ntBASIC16.69■□□□□ 0.26
CHL1O00533 MYL6-215ENST00000549566 685 ntTSL 2 BASIC16.69■□□□□ 0.26
CHL1O00533 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 PHF23-213ENST00000613632 850 ntTSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHL1O00533 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.69■□□□□ 0.26
CHL1O00533 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC16.69■□□□□ 0.26
CHL1O00533 NBPF13P-201ENST00000444082 1783 ntBASIC16.69■□□□□ 0.26
CHL1O00533 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHL1O00533 Z82170.1-201ENST00000625081 3192 ntBASIC16.69■□□□□ 0.26
CHL1O00533 AC126755.1-201ENST00000525846 6405 ntBASIC16.69■□□□□ 0.26
CHL1O00533 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHL1O00533 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC16.68■□□□□ 0.26
CHL1O00533 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CHL1O00533 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHL1O00533 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHL1O00533 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC16.68■□□□□ 0.26
CHL1O00533 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms