Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC13.17□□□□□ -0.3
CSNK1DP48730 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC13.17□□□□□ -0.3
CSNK1DP48730 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 AC233724.9-201ENST00000511694 407 ntBASIC13.17□□□□□ -0.3
CSNK1DP48730 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC13.17□□□□□ -0.3
CSNK1DP48730 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 NAV1-210ENST00000593583 726 ntBASIC13.17□□□□□ -0.3
CSNK1DP48730 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 PRR20FP-201ENST00000603320 180 ntBASIC13.17□□□□□ -0.3
CSNK1DP48730 PRMT1P1-201ENST00000604252 1009 ntBASIC13.17□□□□□ -0.3
CSNK1DP48730 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 MIR6770-3-201ENST00000616362 60 ntBASIC13.17□□□□□ -0.3
CSNK1DP48730 MIR6770-2-201ENST00000618304 60 ntBASIC13.17□□□□□ -0.3
CSNK1DP48730 MIR6770-1-201ENST00000622248 60 ntBASIC13.17□□□□□ -0.3
CSNK1DP48730 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.17□□□□□ -0.3
CSNK1DP48730 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1DP48730 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1DP48730 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CSNK1DP48730 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1DP48730 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CSNK1DP48730 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CSNK1DP48730 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1DP48730 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CSNK1DP48730 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1DP48730 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 SLC25A6P1-201ENST00000412123 775 ntBASIC13.16□□□□□ -0.3
CSNK1DP48730 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1DP48730 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.16□□□□□ -0.3
CSNK1DP48730 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1DP48730 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 CDCA4P4-201ENST00000435216 680 ntBASIC13.16□□□□□ -0.3
CSNK1DP48730 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1DP48730 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1DP48730 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC13.16□□□□□ -0.3
CSNK1DP48730 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 AC063924.1-201ENST00000546680 673 ntBASIC13.16□□□□□ -0.3
CSNK1DP48730 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1DP48730 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.16□□□□□ -0.3
CSNK1DP48730 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC13.16□□□□□ -0.3
CSNK1DP48730 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 AC104440.1-201ENST00000605010 343 ntBASIC13.16□□□□□ -0.3
CSNK1DP48730 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 AC020922.4-201ENST00000621389 339 ntBASIC13.16□□□□□ -0.3
CSNK1DP48730 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1DP48730 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC13.16□□□□□ -0.3
CSNK1DP48730 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CSNK1DP48730 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CSNK1DP48730 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC13.16□□□□□ -0.3
CSNK1DP48730 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CSNK1DP48730 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.16□□□□□ -0.3
CSNK1DP48730 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSNK1DP48730 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1DP48730 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms