Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 PHBP10-201ENST00000416467 784 ntBASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 RPL18AP16-201ENST00000424057 531 ntBASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 MIR4746-201ENST00000579802 71 ntBASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC123912.6-201ENST00000612657 315 ntBASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC018695.6-201ENST00000614011 534 ntBASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC010531.8-201ENST00000623341 685 ntBASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NPIPA3F8WFD2 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AC010970.1-201ENST00000445125 1848 ntBASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AC026271.4-201ENST00000578214 1833 ntBASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AL137244.1-201ENST00000422931 865 ntBASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 KRT8P30-201ENST00000432100 650 ntBASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 HNRNPA3P12-201ENST00000437410 1063 ntBASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 RNLS-203ENST00000437752 525 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 RPSAP70-201ENST00000504462 864 ntBASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 SRPK2P-201ENST00000523408 1100 ntBASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 PHBP18-201ENST00000546648 813 ntBASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.09□□□□□ -0.47
NPIPA3F8WFD2 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms