Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA4Q9Y5G9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA4Q9Y5G9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA4Q9Y5G9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA4Q9Y5G9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHGA4Q9Y5G9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 AC009102.2-201ENST00000606772 1639 ntBASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 SERBP1P1-201ENST00000396021 1160 ntBASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 AC027682.1-201ENST00000562846 899 ntBASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
PCDHGA4Q9Y5G9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA4Q9Y5G9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGA4Q9Y5G9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGA4Q9Y5G9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGA4Q9Y5G9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDHGA4Q9Y5G9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA4Q9Y5G9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PCDHGA4Q9Y5G9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGA4Q9Y5G9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA4Q9Y5G9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA4Q9Y5G9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHGA4Q9Y5G9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
PCDHGA4Q9Y5G9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA4Q9Y5G9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA4Q9Y5G9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA4Q9Y5G9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGA4Q9Y5G9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 AC008764.7-201ENST00000593779 1081 ntBASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 AC099791.2-201ENST00000605725 427 ntBASIC21.53■■□□□ 1.04
PCDHGA4Q9Y5G9 AC011298.3-201ENST00000615796 283 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms