Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 AL035685.1-201ENST00000636663 812 ntBASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF11Q9Y3C5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RNF11Q9Y3C5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RNF11Q9Y3C5 ESRRAP2-201ENST00000418437 1549 ntBASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF11Q9Y3C5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 DUX4L4-201ENST00000566884 1269 ntBASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF11Q9Y3C5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 MIR6724-1-201ENST00000616420 92 ntBASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 MIR6724-2-201ENST00000616483 92 ntBASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 MIR6724-4-201ENST00000617390 92 ntBASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 MIR6724-3-201ENST00000622482 92 ntBASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 ECEL1P1-201ENST00000373592 1742 ntBASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RNF11Q9Y3C5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF11Q9Y3C5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 C17orf82-201ENST00000623772 1530 ntBASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms