Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 AC016575.1-201ENST00000607026 382 ntBASIC19.66■□□□□ 0.74
SSR3Q9UNL2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR3Q9UNL2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR3Q9UNL2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR3Q9UNL2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR3Q9UNL2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR3Q9UNL2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SSR3Q9UNL2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.66■□□□□ 0.74
SSR3Q9UNL2 AC131274.2-201ENST00000580697 1507 ntBASIC19.66■□□□□ 0.74
SSR3Q9UNL2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 AL353803.4-201ENST00000565882 1934 ntBASIC19.65■□□□□ 0.74
SSR3Q9UNL2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR3Q9UNL2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSR3Q9UNL2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSR3Q9UNL2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
SSR3Q9UNL2 AC073130.3-201ENST00000624389 2278 ntBASIC19.64■□□□□ 0.74
SSR3Q9UNL2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSR3Q9UNL2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR3Q9UNL2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR3Q9UNL2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SSR3Q9UNL2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR3Q9UNL2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR3Q9UNL2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR3Q9UNL2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 AC087742.1-201ENST00000575880 1738 ntBASIC19.63■□□□□ 0.73
SSR3Q9UNL2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR3Q9UNL2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 RPS2P35-201ENST00000443417 897 ntBASIC19.62■□□□□ 0.73
SSR3Q9UNL2 RPS2P7-201ENST00000447334 885 ntBASIC19.62■□□□□ 0.73
SSR3Q9UNL2 AC010542.4-201ENST00000563151 1910 ntBASIC19.62■□□□□ 0.73
SSR3Q9UNL2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SSR3Q9UNL2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR3Q9UNL2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 AC022413.1-201ENST00000624602 984 ntBASIC19.6■□□□□ 0.73
SSR3Q9UNL2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 AC005229.4-201ENST00000610085 2198 ntBASIC19.6■□□□□ 0.73
SSR3Q9UNL2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR3Q9UNL2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR3Q9UNL2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.59■□□□□ 0.73
SSR3Q9UNL2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR3Q9UNL2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR3Q9UNL2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR3Q9UNL2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR3Q9UNL2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SSR3Q9UNL2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR3Q9UNL2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SSR3Q9UNL2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR3Q9UNL2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SSR3Q9UNL2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR3Q9UNL2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR3Q9UNL2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.58■□□□□ 0.73
SSR3Q9UNL2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR3Q9UNL2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms