Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD3Q9UBI1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD3Q9UBI1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD3Q9UBI1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3Q9UBI1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 AL121603.2-201ENST00000557373 2117 ntBASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3Q9UBI1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 AC010542.4-201ENST00000563151 1910 ntBASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 AC026202.3-201ENST00000600805 1127 ntBASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 RAP2CP1-202ENST00000605179 643 ntBASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3Q9UBI1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 MIR3648-2-201ENST00000581792 180 ntBASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 MIR3648-1-201ENST00000615959 180 ntBASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3Q9UBI1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 AL353803.4-201ENST00000565882 1934 ntBASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 AC087742.1-201ENST00000575880 1738 ntBASIC19.34■□□□□ 0.69
COMMD3Q9UBI1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
COMMD3Q9UBI1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.33■□□□□ 0.69
COMMD3Q9UBI1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD3Q9UBI1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD3Q9UBI1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD3Q9UBI1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.33■□□□□ 0.69
COMMD3Q9UBI1 AC007029.1-201ENST00000604183 313 ntBASIC19.33■□□□□ 0.68
COMMD3Q9UBI1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD3Q9UBI1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD3Q9UBI1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.33■□□□□ 0.68
COMMD3Q9UBI1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3Q9UBI1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 AC131274.2-201ENST00000580697 1507 ntBASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3Q9UBI1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms