Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD1Q9NXG2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.7■□□□□ 0.91
THUMPD1Q9NXG2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 AC009086.3-201ENST00000623486 1008 ntBASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD1Q9NXG2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 DUX4L4-201ENST00000566884 1269 ntBASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD1Q9NXG2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD1Q9NXG2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 MTDHP2-201ENST00000601468 714 ntBASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
THUMPD1Q9NXG2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD1Q9NXG2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD1Q9NXG2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
THUMPD1Q9NXG2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
THUMPD1Q9NXG2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 MIR4787-201ENST00000607364 84 ntBASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms