Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF216Q9NWF9 AC004812.2-201ENST00000611079 2094 ntBASIC24.81■■□□□ 1.56
RNF216Q9NWF9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
RNF216Q9NWF9 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.81■■□□□ 1.56
RNF216Q9NWF9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.81■■□□□ 1.56
RNF216Q9NWF9 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC24.81■■□□□ 1.56
RNF216Q9NWF9 AC009102.2-201ENST00000606772 1639 ntBASIC24.81■■□□□ 1.56
RNF216Q9NWF9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.81■■□□□ 1.56
RNF216Q9NWF9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.81■■□□□ 1.56
RNF216Q9NWF9 DUSP8P5-201ENST00000422884 1815 ntBASIC24.81■■□□□ 1.56
RNF216Q9NWF9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF216Q9NWF9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF216Q9NWF9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RNF216Q9NWF9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RNF216Q9NWF9 ABCB10P4-201ENST00000566803 2184 ntBASIC24.8■■□□□ 1.56
RNF216Q9NWF9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.8■■□□□ 1.56
RNF216Q9NWF9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF216Q9NWF9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.8■■□□□ 1.56
RNF216Q9NWF9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.8■■□□□ 1.56
RNF216Q9NWF9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RNF216Q9NWF9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF216Q9NWF9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 AC026271.2-201ENST00000428091 497 ntBASIC24.79■■□□□ 1.56
RNF216Q9NWF9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 AC016180.1-201ENST00000567945 403 ntBASIC24.79■■□□□ 1.56
RNF216Q9NWF9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 GAPDHP74-202ENST00000632456 782 ntBASIC24.79■■□□□ 1.56
RNF216Q9NWF9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF216Q9NWF9 C17orf82-201ENST00000623772 1530 ntBASIC24.78■■□□□ 1.56
RNF216Q9NWF9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF216Q9NWF9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF216Q9NWF9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
RNF216Q9NWF9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF216Q9NWF9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF216Q9NWF9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF216Q9NWF9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF216Q9NWF9 AL078595.1-201ENST00000404458 226 ntBASIC24.77■■□□□ 1.56
RNF216Q9NWF9 CA15P2-201ENST00000611168 834 ntBASIC24.77■■□□□ 1.56
RNF216Q9NWF9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
RNF216Q9NWF9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF216Q9NWF9 AC079834.2-201ENST00000609776 1949 ntBASIC24.76■■□□□ 1.55
RNF216Q9NWF9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF216Q9NWF9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.75■■□□□ 1.55
RNF216Q9NWF9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF216Q9NWF9 AC136469.2-201ENST00000623944 1028 ntBASIC24.75■■□□□ 1.55
RNF216Q9NWF9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF216Q9NWF9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF216Q9NWF9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF216Q9NWF9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF216Q9NWF9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF216Q9NWF9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF216Q9NWF9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF216Q9NWF9 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC24.74■■□□□ 1.55
RNF216Q9NWF9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF216Q9NWF9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF216Q9NWF9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF216Q9NWF9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF216Q9NWF9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 AC104564.3-201ENST00000582367 638 ntBASIC24.73■■□□□ 1.55
RNF216Q9NWF9 AC092723.2-201ENST00000624955 793 ntBASIC24.73■■□□□ 1.55
RNF216Q9NWF9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF216Q9NWF9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 AL109620.1-201ENST00000618738 1197 ntBASIC24.72■■□□□ 1.55
RNF216Q9NWF9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF216Q9NWF9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms