Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 AC135279.3-201ENST00000610945 1311 ntBASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ECHDC1Q9NTX5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ECHDC1Q9NTX5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ECHDC1Q9NTX5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.96■■□□□ 1.91
ECHDC1Q9NTX5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.96■■□□□ 1.91
ECHDC1Q9NTX5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ECHDC1Q9NTX5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ECHDC1Q9NTX5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
ECHDC1Q9NTX5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
ECHDC1Q9NTX5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
ECHDC1Q9NTX5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.95■■□□□ 1.91
ECHDC1Q9NTX5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
ECHDC1Q9NTX5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
ECHDC1Q9NTX5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.95■■□□□ 1.9
ECHDC1Q9NTX5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.95■■□□□ 1.9
ECHDC1Q9NTX5 MIR4767-201ENST00000582827 78 ntBASIC26.95■■□□□ 1.9
ECHDC1Q9NTX5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
ECHDC1Q9NTX5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 OR2I1P-207ENST00000453522 948 ntBASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 PBX2P1-201ENST00000493219 1291 ntBASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 AC106739.1-201ENST00000617035 715 ntBASIC26.94■■□□□ 1.9
ECHDC1Q9NTX5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.93■■□□□ 1.9
ECHDC1Q9NTX5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ECHDC1Q9NTX5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
ECHDC1Q9NTX5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
ECHDC1Q9NTX5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.93■■□□□ 1.9
ECHDC1Q9NTX5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.93■■□□□ 1.9
ECHDC1Q9NTX5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
ECHDC1Q9NTX5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.93■■□□□ 1.9
ECHDC1Q9NTX5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 AC133561.1-201ENST00000568600 2415 ntBASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.92■■□□□ 1.9
ECHDC1Q9NTX5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 AC010525.1-201ENST00000585559 441 ntBASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 AL139246.5-201ENST00000606645 996 ntBASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ECHDC1Q9NTX5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
ECHDC1Q9NTX5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ECHDC1Q9NTX5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
ECHDC1Q9NTX5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ECHDC1Q9NTX5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ECHDC1Q9NTX5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
ECHDC1Q9NTX5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.89
ECHDC1Q9NTX5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 LINC01960-201ENST00000563759 1884 ntBASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 SLC47A1P1-202ENST00000449666 945 ntBASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms