Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H2Q9HBD1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H2Q9HBD1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.83■■□□□ 1.41
RC3H2Q9HBD1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H2Q9HBD1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.83■■□□□ 1.4
RC3H2Q9HBD1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 AC138932.3-201ENST00000567634 1902 ntBASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 AC016769.1-201ENST00000409132 1010 ntBASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H2Q9HBD1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H2Q9HBD1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RC3H2Q9HBD1 BX005040.4-201ENST00000637145 1518 ntBASIC23.8■■□□□ 1.4
RC3H2Q9HBD1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RC3H2Q9HBD1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RC3H2Q9HBD1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.8■■□□□ 1.4
RC3H2Q9HBD1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RC3H2Q9HBD1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.8■■□□□ 1.4
RC3H2Q9HBD1 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.8■■□□□ 1.4
RC3H2Q9HBD1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 AC142381.3-201ENST00000568208 1670 ntBASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.79■■□□□ 1.4
RC3H2Q9HBD1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RC3H2Q9HBD1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 AC026185.1-201ENST00000445748 174 ntBASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 AC104771.1-201ENST00000603335 964 ntBASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RC3H2Q9HBD1 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 CROCCP5-201ENST00000436658 830 ntBASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 BID-214ENST00000617586 542 ntTSL 5 BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
RC3H2Q9HBD1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 SMUG1P1-201ENST00000590640 811 ntBASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.75■■□□□ 1.39
RC3H2Q9HBD1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 AC068587.7-201ENST00000641602 218 ntBASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RC3H2Q9HBD1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H2Q9HBD1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms