Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.3□□□□□ -0.283e-27■■■■□ 24.4
CSTF2TQ9H0L4 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)7.11□□□□□ -1.273e-27■■■■□ 24.4
CSTF2TQ9H0L4 LRRC75A-AS1-211ENST00000483140 936 ntTSL 25.63□□□□□ -1.513e-27■■■■□ 24.4
CSTF2TQ9H0L4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.84■□□□□ 0.292e-9■■■■□ 24.4
CSTF2TQ9H0L4 PLEC-214ENST00000528131 564 ntTSL 317.62■□□□□ 0.414e-7■■■■□ 24.4
CSTF2TQ9H0L4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.05□□□□□ -0.327e-7■■■■□ 24.4
CSTF2TQ9H0L4 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC10.95□□□□□ -0.667e-7■■■■□ 24.4
CSTF2TQ9H0L4 SIRT5-202ENST00000379250 3727 ntTSL 1 (best)8.99□□□□□ -0.977e-7■■■■□ 24.4
CSTF2TQ9H0L4 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC8.94□□□□□ -0.987e-7■■■■□ 24.4
CSTF2TQ9H0L4 SIRT5-206ENST00000606427 571 ntTSL 46.4□□□□□ -1.387e-7■■■■□ 24.4
CSTF2TQ9H0L4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.02■□□□□ 0.162e-9■■■■□ 24.4
CSTF2TQ9H0L4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.91■□□□□ 0.142e-9■■■■□ 24.4
CSTF2TQ9H0L4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.316e-7■■■■□ 24.4
CSTF2TQ9H0L4 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC10.33□□□□□ -0.764e-9■■■■□ 24.4
CSTF2TQ9H0L4 AHDC1-205ENST00000490295 511 ntTSL 515.05■□□□□ -01e-6■■■■□ 24.4
CSTF2TQ9H0L4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.98□□□□□ -0.171e-6■■■■□ 24.4
CSTF2TQ9H0L4 HAPLN3-205ENST00000563808 807 ntTSL 216.35■□□□□ 0.215e-7■■■■□ 24.4
CSTF2TQ9H0L4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.94■□□□□ 0.145e-7■■■■□ 24.4
CSTF2TQ9H0L4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.045e-7■■■■□ 24.4
CSTF2TQ9H0L4 HAPLN3-203ENST00000562281 801 ntTSL 314.3□□□□□ -0.125e-7■■■■□ 24.4
CSTF2TQ9H0L4 HAPLN3-202ENST00000558770 3071 ntTSL 211.74□□□□□ -0.535e-7■■■■□ 24.4
CSTF2TQ9H0L4 RAP1GAP-210ENST00000482984 331 ntTSL 55.9□□□□□ -1.463e-7■■■■□ 24.4
CSTF2TQ9H0L4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.092e-7■■■■□ 24.4
CSTF2TQ9H0L4 FAF1-201ENST00000371778 1643 ntTSL 1 (best) BASIC9.11□□□□□ -0.952e-7■■■■□ 24.4
CSTF2TQ9H0L4 FAF1-204ENST00000487898 681 ntTSL 35.64□□□□□ -1.512e-7■■■■□ 24.4
CSTF2TQ9H0L4 C9orf3-208ENST00000451893 514 ntTSL 320.49■□□□□ 0.874e-7■■■■□ 24.4
CSTF2TQ9H0L4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.13■□□□□ 0.811e-6■■■■□ 24.4
CSTF2TQ9H0L4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.97■□□□□ 0.471e-6■■■■□ 24.4
CSTF2TQ9H0L4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.53■□□□□ 0.41e-6■■■■□ 24.4
CSTF2TQ9H0L4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.48■□□□□ 0.397e-7■■■■□ 24.4
CSTF2TQ9H0L4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.111e-6■■■■□ 24.4
CSTF2TQ9H0L4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.111e-6■■■■□ 24.4
CSTF2TQ9H0L4 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC11.91□□□□□ -0.51e-6■■■■□ 24.4
CSTF2TQ9H0L4 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC8.41□□□□□ -1.069e-7■■■■□ 24.4
CSTF2TQ9H0L4 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.712e-7■■■■□ 24.3
CSTF2TQ9H0L4 MED16-206ENST00000586342 635 ntTSL 1 (best)20.91■□□□□ 0.941e-7■■■■□ 24.3
CSTF2TQ9H0L4 GPSM2-203ENST00000435475 992 ntTSL 319.92■□□□□ 0.789e-8■■■■□ 24.3
CSTF2TQ9H0L4 MBD6-210ENST00000549623 544 ntTSL 419.85■□□□□ 0.779e-8■■■■□ 24.3
CSTF2TQ9H0L4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.759e-8■■■■□ 24.3
CSTF2TQ9H0L4 GPSM2-204ENST00000435987 904 ntTSL 319.28■□□□□ 0.689e-8■■■■□ 24.3
CSTF2TQ9H0L4 REXO1-205ENST00000587524 1390 ntTSL 1 (best)19.19■□□□□ 0.669e-8■■■■□ 24.3
CSTF2TQ9H0L4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.559e-8■■■■□ 24.3
CSTF2TQ9H0L4 SLC27A5-205ENST00000595851 2003 ntTSL 216.91■□□□□ 0.39e-8■■■■□ 24.3
CSTF2TQ9H0L4 TCF20-204ENST00000515426 633 ntTSL 516.19■□□□□ 0.188e-8■■■■□ 24.3
CSTF2TQ9H0L4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.179e-8■■■■□ 24.3
CSTF2TQ9H0L4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.189e-8■■■■□ 24.3
CSTF2TQ9H0L4 MBD6-207ENST00000548887 568 ntTSL 413.25□□□□□ -0.299e-8■■■■□ 24.3
CSTF2TQ9H0L4 GPSM2-206ENST00000446797 571 ntTSL 47.78□□□□□ -1.169e-8■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.432e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-208ENST00000520872 560 ntTSL 317.72■□□□□ 0.432e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.98□□□□□ -0.172e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-204ENST00000518767 1146 ntTSL 1 (best)13.83□□□□□ -0.22e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-228ENST00000524191 808 ntTSL 311.17□□□□□ -0.622e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC10.99□□□□□ -0.652e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-203ENST00000518502 687 ntTSL 310.99□□□□□ -0.652e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC10.36□□□□□ -0.752e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-214ENST00000521451 2712 ntTSL 1 (best) BASIC10.35□□□□□ -0.752e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC9.05□□□□□ -0.962e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-216ENST00000521736 550 ntTSL 58.31□□□□□ -1.082e-7■■■■□ 24.3
CSTF2TQ9H0L4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.081e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.7□□□□□ -1.182e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC7.32□□□□□ -1.242e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-218ENST00000522061 564 ntTSL 46.88□□□□□ -1.312e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-213ENST00000521447 727 ntTSL 56.76□□□□□ -1.332e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-227ENST00000524113 658 ntTSL 26.52□□□□□ -1.372e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-205ENST00000518981 1746 ntTSL 26.36□□□□□ -1.392e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-206ENST00000519818 590 ntTSL 46.05□□□□□ -1.442e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-217ENST00000521845 546 ntTSL 55.82□□□□□ -1.482e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-223ENST00000523160 227 ntTSL 35.42□□□□□ -1.542e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.05□□□□□ -1.62e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-211ENST00000521293 552 ntTSL 44.92□□□□□ -1.622e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-209ENST00000520945 472 ntTSL 43.9□□□□□ -1.792e-7■■■■□ 24.3
CSTF2TQ9H0L4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.92e-7■■■■□ 24.3
CSTF2TQ9H0L4 GRB10-221ENST00000483819 657 ntTSL 220.48■□□□□ 0.873e-7■■■■□ 24.3
CSTF2TQ9H0L4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.063e-9■■■■□ 24.3
CSTF2TQ9H0L4 ZNF514-203ENST00000447814 554 ntTSL 48.46□□□□□ -1.063e-9■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.16■□□□□ 0.823e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.4■□□□□ 0.063e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.36■□□□□ 0.053e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.4□□□□□ -0.263e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC12.11□□□□□ -0.473e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-219ENST00000630986 588 ntTSL 29□□□□□ -0.973e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.84□□□□□ -1.313e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.53□□□□□ -1.363e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.14□□□□□ -1.433e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-216ENST00000630010 575 ntTSL 56.09□□□□□ -1.433e-7■■■■□ 24.3
CSTF2TQ9H0L4 ITGA9-AS1-215ENST00000629314 417 ntTSL 56.01□□□□□ -1.453e-7■■■■□ 24.3
CSTF2TQ9H0L4 ZEB1-214ENST00000558863 1355 ntTSL 522.53■■□□□ 1.21e-8■■■■□ 24.3
CSTF2TQ9H0L4 ZEB1-222ENST00000561212 1500 ntTSL 56.68□□□□□ -1.341e-8■■■■□ 24.3
CSTF2TQ9H0L4 IFITM10-204ENST00000486852 369 ntTSL 518.33■□□□□ 0.528e-7■■■■□ 24.3
CSTF2TQ9H0L4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.74■□□□□ 0.918e-7■■■■□ 24.3
CSTF2TQ9H0L4 RBM38-201ENST00000342690 852 ntTSL 320.27■□□□□ 0.848e-7■■■■□ 24.3
CSTF2TQ9H0L4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.668e-7■■■■□ 24.3
CSTF2TQ9H0L4 RBM38-202ENST00000344785 2193 ntTSL 516.58■□□□□ 0.258e-7■■■■□ 24.3
CSTF2TQ9H0L4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.61□□□□□ -0.238e-7■■■■□ 24.3
CSTF2TQ9H0L4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.254e-10■■■■□ 24.3
CSTF2TQ9H0L4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.254e-10■■■■□ 24.3
CSTF2TQ9H0L4 RPS6KC1-204ENST00000490299 5154 ntTSL 1 (best)3.57□□□□□ -1.844e-10■■■■□ 24.3
CSTF2TQ9H0L4 TNK2-207ENST00000427576 541 ntTSL 318.57■□□□□ 0.565e-7■■■■□ 24.3
CSTF2TQ9H0L4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.38■□□□□ 0.211e-7■■■■□ 24.2
Retrieved 100 of 19,151 protein–RNA pairs in 196.6 ms