Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.47■□□□□ 0.71
SLIRPQ9GZT3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLIRPQ9GZT3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 SMPD5-203ENST00000639008 1464 ntBASIC19.45■□□□□ 0.7
SLIRPQ9GZT3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 LINC01006-201ENST00000333319 2292 ntBASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.44■□□□□ 0.7
SLIRPQ9GZT3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLIRPQ9GZT3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 AL162393.1-201ENST00000437852 946 ntBASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 DUX4L11-201ENST00000611504 1267 ntBASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 DUX4L12-201ENST00000614593 1267 ntBASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 DUX4L14-201ENST00000621227 1267 ntBASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 Z98882.1-201ENST00000622160 2253 ntBASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLIRPQ9GZT3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.41■□□□□ 0.7
SLIRPQ9GZT3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLIRPQ9GZT3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
SLIRPQ9GZT3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLIRPQ9GZT3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLIRPQ9GZT3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLIRPQ9GZT3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLIRPQ9GZT3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms