Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 RNF146-205ENST00000477776 762 ntTSL 3 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 SNX5-217ENST00000606557 1087 ntBASIC13.03□□□□□ -0.32
LIMD2Q9BT23 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIMD2Q9BT23 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIMD2Q9BT23 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIMD2Q9BT23 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LIMD2Q9BT23 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LIMD2Q9BT23 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
LIMD2Q9BT23 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC13.02□□□□□ -0.32
LIMD2Q9BT23 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 AC005703.6-201ENST00000623265 1329 ntBASIC13.02□□□□□ -0.33
LIMD2Q9BT23 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 AC092068.2-201ENST00000590491 1708 ntBASIC13.02□□□□□ -0.33
LIMD2Q9BT23 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIMD2Q9BT23 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 MTDHP2-201ENST00000601468 714 ntBASIC13.01□□□□□ -0.33
LIMD2Q9BT23 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIMD2Q9BT23 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LIMD2Q9BT23 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LIMD2Q9BT23 ANOS2P-203ENST00000472227 1816 ntBASIC13□□□□□ -0.33
LIMD2Q9BT23 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC13□□□□□ -0.33
LIMD2Q9BT23 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC13□□□□□ -0.33
LIMD2Q9BT23 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 AC021242.3-201ENST00000607598 1377 ntBASIC13□□□□□ -0.33
LIMD2Q9BT23 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LIMD2Q9BT23 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13□□□□□ -0.33
LIMD2Q9BT23 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC13□□□□□ -0.33
LIMD2Q9BT23 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC13□□□□□ -0.33
LIMD2Q9BT23 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13□□□□□ -0.33
LIMD2Q9BT23 MIR6722-201ENST00000617286 78 ntBASIC13□□□□□ -0.33
LIMD2Q9BT23 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC13□□□□□ -0.33
LIMD2Q9BT23 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC13□□□□□ -0.33
LIMD2Q9BT23 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIMD2Q9BT23 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC12.99□□□□□ -0.33
LIMD2Q9BT23 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms