Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MIR3181-201ENST00000578512 73 ntBASIC18.38■□□□□ 0.53
PCGF1Q9BSM1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCGF1Q9BSM1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCGF1Q9BSM1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCGF1Q9BSM1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCGF1Q9BSM1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCGF1Q9BSM1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCGF1Q9BSM1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 SUDS3P1-201ENST00000505831 966 ntBASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 AL031432.3-201ENST00000607698 485 ntBASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCGF1Q9BSM1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.36■□□□□ 0.53
PCGF1Q9BSM1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 AC092068.2-201ENST00000590491 1708 ntBASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 AP001330.3-201ENST00000520123 633 ntBASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 AC008764.7-201ENST00000593779 1081 ntBASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 AC136469.2-201ENST00000623944 1028 ntBASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.35■□□□□ 0.53
PCGF1Q9BSM1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF1Q9BSM1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 ANOS2P-203ENST00000472227 1816 ntBASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCGF1Q9BSM1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 AL136967.2-201ENST00000623968 743 ntBASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF1Q9BSM1 MIR939-201ENST00000401314 82 ntBASIC18.32■□□□□ 0.52
PCGF1Q9BSM1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms