Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.67■□□□□ 0.26
VGLL1Q99990 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.67■□□□□ 0.26
VGLL1Q99990 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.67■□□□□ 0.26
VGLL1Q99990 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL1Q99990 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
VGLL1Q99990 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL1Q99990 AC080038.3-201ENST00000623346 1952 ntBASIC16.67■□□□□ 0.26
VGLL1Q99990 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL1Q99990 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL1Q99990 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL1Q99990 AC144652.1-201ENST00000609974 1624 ntBASIC16.67■□□□□ 0.26
VGLL1Q99990 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 AC092053.2-201ENST00000640557 1818 ntBASIC16.66■□□□□ 0.26
VGLL1Q99990 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL1Q99990 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL1Q99990 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.66■□□□□ 0.26
VGLL1Q99990 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL1Q99990 MIR4508-201ENST00000584178 70 ntBASIC16.66■□□□□ 0.26
VGLL1Q99990 SNX5-217ENST00000606557 1087 ntBASIC16.66■□□□□ 0.26
VGLL1Q99990 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VGLL1Q99990 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL1Q99990 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL1Q99990 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VGLL1Q99990 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL1Q99990 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.65■□□□□ 0.26
VGLL1Q99990 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
VGLL1Q99990 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VGLL1Q99990 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.65■□□□□ 0.26
VGLL1Q99990 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VGLL1Q99990 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
VGLL1Q99990 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VGLL1Q99990 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VGLL1Q99990 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VGLL1Q99990 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL1Q99990 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.65■□□□□ 0.26
VGLL1Q99990 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.65■□□□□ 0.26
VGLL1Q99990 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VGLL1Q99990 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.65■□□□□ 0.26
VGLL1Q99990 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
VGLL1Q99990 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.64■□□□□ 0.25
VGLL1Q99990 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VGLL1Q99990 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VGLL1Q99990 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.64■□□□□ 0.25
VGLL1Q99990 C11orf96-202ENST00000528572 1834 ntBASIC16.64■□□□□ 0.25
VGLL1Q99990 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VGLL1Q99990 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VGLL1Q99990 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VGLL1Q99990 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VGLL1Q99990 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
VGLL1Q99990 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VGLL1Q99990 AC087742.1-201ENST00000575880 1738 ntBASIC16.64■□□□□ 0.25
VGLL1Q99990 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.64■□□□□ 0.25
VGLL1Q99990 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VGLL1Q99990 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VGLL1Q99990 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VGLL1Q99990 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VGLL1Q99990 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
VGLL1Q99990 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 SLC25A24-204ENST00000569674 2357 ntBASIC16.63■□□□□ 0.25
VGLL1Q99990 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.63■□□□□ 0.25
VGLL1Q99990 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.63■□□□□ 0.25
VGLL1Q99990 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.63■□□□□ 0.25
VGLL1Q99990 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.63■□□□□ 0.25
VGLL1Q99990 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.63■□□□□ 0.25
VGLL1Q99990 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.63■□□□□ 0.25
VGLL1Q99990 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VGLL1Q99990 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VGLL1Q99990 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
VGLL1Q99990 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VGLL1Q99990 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VGLL1Q99990 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VGLL1Q99990 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.62■□□□□ 0.25
VGLL1Q99990 AC103834.1-201ENST00000520383 144 ntBASIC16.62■□□□□ 0.25
VGLL1Q99990 AC012354.3-201ENST00000623734 483 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms