Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.15■□□□□ 0.82
SPENQ96T58 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPENQ96T58 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPENQ96T58 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPENQ96T58 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.82
SPENQ96T58 AC142086.2-201ENST00000569753 217 ntBASIC20.14■□□□□ 0.82
SPENQ96T58 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPENQ96T58 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPENQ96T58 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPENQ96T58 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPENQ96T58 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.14■□□□□ 0.81
SPENQ96T58 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPENQ96T58 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPENQ96T58 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.14■□□□□ 0.81
SPENQ96T58 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPENQ96T58 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.14■□□□□ 0.81
SPENQ96T58 AC137761.2-201ENST00000561729 223 ntBASIC20.14■□□□□ 0.81
SPENQ96T58 AC145350.3-201ENST00000569033 163 ntBASIC20.14■□□□□ 0.81
SPENQ96T58 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.14■□□□□ 0.81
SPENQ96T58 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPENQ96T58 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SPENQ96T58 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SPENQ96T58 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPENQ96T58 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SPENQ96T58 AC026185.1-201ENST00000445748 174 ntBASIC20.13■□□□□ 0.81
SPENQ96T58 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SPENQ96T58 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.13■□□□□ 0.81
SPENQ96T58 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPENQ96T58 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.13■□□□□ 0.81
SPENQ96T58 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPENQ96T58 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPENQ96T58 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.13■□□□□ 0.81
SPENQ96T58 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.13■□□□□ 0.81
SPENQ96T58 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.13■□□□□ 0.81
SPENQ96T58 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPENQ96T58 AC138932.3-201ENST00000567634 1902 ntBASIC20.13■□□□□ 0.81
SPENQ96T58 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPENQ96T58 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.12■□□□□ 0.81
SPENQ96T58 AC144652.1-201ENST00000609974 1624 ntBASIC20.12■□□□□ 0.81
SPENQ96T58 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.12■□□□□ 0.81
SPENQ96T58 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPENQ96T58 SLC7A5P2-201ENST00000553010 536 ntBASIC20.12■□□□□ 0.81
SPENQ96T58 AL138781.1-201ENST00000566567 1274 ntBASIC20.12■□□□□ 0.81
SPENQ96T58 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPENQ96T58 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPENQ96T58 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.11■□□□□ 0.81
SPENQ96T58 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPENQ96T58 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPENQ96T58 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPENQ96T58 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.11■□□□□ 0.81
SPENQ96T58 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPENQ96T58 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SPENQ96T58 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPENQ96T58 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPENQ96T58 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.11■□□□□ 0.81
SPENQ96T58 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPENQ96T58 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SPENQ96T58 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPENQ96T58 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SPENQ96T58 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPENQ96T58 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPENQ96T58 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPENQ96T58 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPENQ96T58 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPENQ96T58 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.1■□□□□ 0.81
SPENQ96T58 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.1■□□□□ 0.81
SPENQ96T58 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.1■□□□□ 0.81
SPENQ96T58 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPENQ96T58 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.09■□□□□ 0.81
SPENQ96T58 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SPENQ96T58 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SPENQ96T58 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SPENQ96T58 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.09■□□□□ 0.81
SPENQ96T58 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPENQ96T58 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPENQ96T58 BID-214ENST00000617586 542 ntTSL 5 BASIC20.09■□□□□ 0.81
SPENQ96T58 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPENQ96T58 LINC02228-203ENST00000641970 1355 ntBASIC20.09■□□□□ 0.81
SPENQ96T58 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
SPENQ96T58 AP004607.4-201ENST00000530158 1459 ntBASIC20.09■□□□□ 0.81
SPENQ96T58 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.09■□□□□ 0.81
SPENQ96T58 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.09■□□□□ 0.81
SPENQ96T58 ABCB10P4-201ENST00000566803 2184 ntBASIC20.09■□□□□ 0.81
SPENQ96T58 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPENQ96T58 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPENQ96T58 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.08■□□□□ 0.81
SPENQ96T58 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPENQ96T58 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPENQ96T58 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPENQ96T58 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SPENQ96T58 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPENQ96T58 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.08■□□□□ 0.81
SPENQ96T58 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
SPENQ96T58 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPENQ96T58 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.08■□□□□ 0.8
SPENQ96T58 AC141586.4-201ENST00000624558 1573 ntBASIC20.08■□□□□ 0.8
SPENQ96T58 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.08■□□□□ 0.8
SPENQ96T58 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPENQ96T58 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPENQ96T58 AC098590.1-201ENST00000468126 897 ntBASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms