Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.29■■□□□ 1.8
CDK5RAP2Q96SN8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.29■■□□□ 1.8
CDK5RAP2Q96SN8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.29■■□□□ 1.8
CDK5RAP2Q96SN8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDK5RAP2Q96SN8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 TERF1P2-201ENST00000583350 1212 ntBASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.28■■□□□ 1.8
CDK5RAP2Q96SN8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDK5RAP2Q96SN8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDK5RAP2Q96SN8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.27■■□□□ 1.8
CDK5RAP2Q96SN8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDK5RAP2Q96SN8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.27■■□□□ 1.8
CDK5RAP2Q96SN8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDK5RAP2Q96SN8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.27■■□□□ 1.8
CDK5RAP2Q96SN8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CDK5RAP2Q96SN8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.26■■□□□ 1.79
CDK5RAP2Q96SN8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDK5RAP2Q96SN8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CDK5RAP2Q96SN8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.26■■□□□ 1.79
CDK5RAP2Q96SN8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CDK5RAP2Q96SN8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDK5RAP2Q96SN8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDK5RAP2Q96SN8 ANOS2P-203ENST00000472227 1816 ntBASIC26.24■■□□□ 1.79
CDK5RAP2Q96SN8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CDK5RAP2Q96SN8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDK5RAP2Q96SN8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.23■■□□□ 1.79
CDK5RAP2Q96SN8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.23■■□□□ 1.79
CDK5RAP2Q96SN8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDK5RAP2Q96SN8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.23■■□□□ 1.79
CDK5RAP2Q96SN8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDK5RAP2Q96SN8 AC087239.1-201ENST00000622671 572 ntBASIC26.23■■□□□ 1.79
CDK5RAP2Q96SN8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CDK5RAP2Q96SN8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.22■■□□□ 1.79
CDK5RAP2Q96SN8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 KRT18P61-201ENST00000585825 1298 ntBASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CDK5RAP2Q96SN8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CDK5RAP2Q96SN8 AC093323.1-202ENST00000635031 2045 ntBASIC26.2■■□□□ 1.79
CDK5RAP2Q96SN8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDK5RAP2Q96SN8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.2■■□□□ 1.78
CDK5RAP2Q96SN8 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.2■■□□□ 1.78
CDK5RAP2Q96SN8 AC092666.2-201ENST00000613287 246 ntBASIC26.2■■□□□ 1.78
CDK5RAP2Q96SN8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.2■■□□□ 1.78
CDK5RAP2Q96SN8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.2■■□□□ 1.78
CDK5RAP2Q96SN8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.2■■□□□ 1.78
CDK5RAP2Q96SN8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.2■■□□□ 1.78
CDK5RAP2Q96SN8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDK5RAP2Q96SN8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDK5RAP2Q96SN8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms