Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H4Q96RI1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H4Q96RI1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H4Q96RI1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.73■□□□□ 0.91
NR1H4Q96RI1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
NR1H4Q96RI1 HLA-V-202ENST00000446817 847 ntBASIC20.73■□□□□ 0.91
NR1H4Q96RI1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR1H4Q96RI1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NR1H4Q96RI1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR1H4Q96RI1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NR1H4Q96RI1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NR1H4Q96RI1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 AF106564.1-201ENST00000607058 2553 ntBASIC20.71■□□□□ 0.91
NR1H4Q96RI1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H4Q96RI1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
NR1H4Q96RI1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
NR1H4Q96RI1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
NR1H4Q96RI1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H4Q96RI1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H4Q96RI1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
NR1H4Q96RI1 ABHD17AP4-201ENST00000411545 909 ntBASIC20.7■□□□□ 0.9
NR1H4Q96RI1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.7■□□□□ 0.9
NR1H4Q96RI1 AC148477.6-201ENST00000623746 465 ntBASIC20.7■□□□□ 0.9
NR1H4Q96RI1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.7■□□□□ 0.9
NR1H4Q96RI1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H4Q96RI1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.7■□□□□ 0.9
NR1H4Q96RI1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H4Q96RI1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.68■□□□□ 0.9
NR1H4Q96RI1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H4Q96RI1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.68■□□□□ 0.9
NR1H4Q96RI1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H4Q96RI1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NR1H4Q96RI1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.68■□□□□ 0.9
NR1H4Q96RI1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 275.6 ms