Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEK1Q96PY6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
NEK1Q96PY6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEK1Q96PY6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEK1Q96PY6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEK1Q96PY6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NEK1Q96PY6 AL117328.2-201ENST00000624617 1940 ntBASIC26.16■■□□□ 1.78
NEK1Q96PY6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
NEK1Q96PY6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.16■■□□□ 1.78
NEK1Q96PY6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NEK1Q96PY6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.16■■□□□ 1.78
NEK1Q96PY6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NEK1Q96PY6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.16■■□□□ 1.78
NEK1Q96PY6 pRNA.6-201ENST00000610482 90 ntBASIC26.16■■□□□ 1.78
NEK1Q96PY6 pRNA.5-201ENST00000612139 90 ntBASIC26.16■■□□□ 1.78
NEK1Q96PY6 pRNA.11-201ENST00000618423 90 ntBASIC26.16■■□□□ 1.78
NEK1Q96PY6 pRNA.13-201ENST00000619112 90 ntBASIC26.16■■□□□ 1.78
NEK1Q96PY6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.16■■□□□ 1.78
NEK1Q96PY6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
NEK1Q96PY6 AC087742.1-201ENST00000575880 1738 ntBASIC26.16■■□□□ 1.78
NEK1Q96PY6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
NEK1Q96PY6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEK1Q96PY6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.15■■□□□ 1.78
NEK1Q96PY6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEK1Q96PY6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.15■■□□□ 1.78
NEK1Q96PY6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.15■■□□□ 1.78
NEK1Q96PY6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.15■■□□□ 1.78
NEK1Q96PY6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.15■■□□□ 1.78
NEK1Q96PY6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.15■■□□□ 1.78
NEK1Q96PY6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
NEK1Q96PY6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NEK1Q96PY6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NEK1Q96PY6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NEK1Q96PY6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.14■■□□□ 1.78
NEK1Q96PY6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
NEK1Q96PY6 GUSBP5-202ENST00000510805 1989 ntBASIC26.14■■□□□ 1.77
NEK1Q96PY6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NEK1Q96PY6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NEK1Q96PY6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NEK1Q96PY6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
NEK1Q96PY6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.77
NEK1Q96PY6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
NEK1Q96PY6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
NEK1Q96PY6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
NEK1Q96PY6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NEK1Q96PY6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEK1Q96PY6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
NEK1Q96PY6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEK1Q96PY6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
NEK1Q96PY6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.12■■□□□ 1.77
NEK1Q96PY6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.12■■□□□ 1.77
NEK1Q96PY6 AC127496.7-201ENST00000625110 1798 ntBASIC26.12■■□□□ 1.77
NEK1Q96PY6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NEK1Q96PY6 AC133637.1-201ENST00000624115 1537 ntBASIC26.11■■□□□ 1.77
NEK1Q96PY6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NEK1Q96PY6 MIR3181-201ENST00000578512 73 ntBASIC26.11■■□□□ 1.77
NEK1Q96PY6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NEK1Q96PY6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NEK1Q96PY6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NEK1Q96PY6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NEK1Q96PY6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NEK1Q96PY6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NEK1Q96PY6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NEK1Q96PY6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
NEK1Q96PY6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
NEK1Q96PY6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.1■■□□□ 1.77
NEK1Q96PY6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NEK1Q96PY6 AC092171.4-201ENST00000609130 632 ntBASIC26.1■■□□□ 1.77
NEK1Q96PY6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NEK1Q96PY6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 LINC01960-201ENST00000563759 1884 ntBASIC26.09■■□□□ 1.77
NEK1Q96PY6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
NEK1Q96PY6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
NEK1Q96PY6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NEK1Q96PY6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NEK1Q96PY6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
NEK1Q96PY6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.08■■□□□ 1.77
NEK1Q96PY6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
NEK1Q96PY6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NEK1Q96PY6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.76
NEK1Q96PY6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
NEK1Q96PY6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NEK1Q96PY6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.07■■□□□ 1.76
NEK1Q96PY6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NEK1Q96PY6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NEK1Q96PY6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
NEK1Q96PY6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
NEK1Q96PY6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NEK1Q96PY6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
NEK1Q96PY6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NEK1Q96PY6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NEK1Q96PY6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms