Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 AC099791.2-201ENST00000605725 427 ntBASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A4EQ96PG1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 LINC01960-201ENST00000563759 1884 ntBASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 AC006455.2-201ENST00000429931 906 ntBASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 AC092171.4-201ENST00000609130 632 ntBASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MS4A4EQ96PG1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 AC087742.1-201ENST00000575880 1738 ntBASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A4EQ96PG1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 AC079834.2-201ENST00000609776 1949 ntBASIC20.54■□□□□ 0.88
MS4A4EQ96PG1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 pRNA.6-201ENST00000610482 90 ntBASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 pRNA.5-201ENST00000612139 90 ntBASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 pRNA.11-201ENST00000618423 90 ntBASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 pRNA.13-201ENST00000619112 90 ntBASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A4EQ96PG1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 AC242852.2-201ENST00000615738 1807 ntBASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.52■□□□□ 0.88
MS4A4EQ96PG1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms