Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.33■■□□□ 1.32
CALR3Q96L12 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CALR3Q96L12 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CALR3Q96L12 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.32■■□□□ 1.32
CALR3Q96L12 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.32■■□□□ 1.32
CALR3Q96L12 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
CALR3Q96L12 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CALR3Q96L12 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CALR3Q96L12 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CALR3Q96L12 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CALR3Q96L12 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CALR3Q96L12 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CALR3Q96L12 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CALR3Q96L12 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CALR3Q96L12 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.31■■□□□ 1.32
CALR3Q96L12 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.31■■□□□ 1.32
CALR3Q96L12 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.31■■□□□ 1.32
CALR3Q96L12 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.31■■□□□ 1.32
CALR3Q96L12 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CALR3Q96L12 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CALR3Q96L12 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.31■■□□□ 1.32
CALR3Q96L12 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.3■■□□□ 1.32
CALR3Q96L12 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CALR3Q96L12 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CALR3Q96L12 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
CALR3Q96L12 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CALR3Q96L12 KRT8P33-201ENST00000508125 1423 ntBASIC23.3■■□□□ 1.32
CALR3Q96L12 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.3■■□□□ 1.32
CALR3Q96L12 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CALR3Q96L12 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.3■■□□□ 1.32
CALR3Q96L12 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CALR3Q96L12 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CALR3Q96L12 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CALR3Q96L12 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CALR3Q96L12 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CALR3Q96L12 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.29■■□□□ 1.32
CALR3Q96L12 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CALR3Q96L12 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CALR3Q96L12 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CALR3Q96L12 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CALR3Q96L12 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CALR3Q96L12 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CALR3Q96L12 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CALR3Q96L12 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CALR3Q96L12 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.29■■□□□ 1.32
CALR3Q96L12 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CALR3Q96L12 AC080038.3-201ENST00000623346 1952 ntBASIC23.29■■□□□ 1.32
CALR3Q96L12 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CALR3Q96L12 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.28■■□□□ 1.32
CALR3Q96L12 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CALR3Q96L12 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.28■■□□□ 1.32
CALR3Q96L12 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.28■■□□□ 1.32
CALR3Q96L12 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CALR3Q96L12 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.28■■□□□ 1.32
CALR3Q96L12 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CALR3Q96L12 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CALR3Q96L12 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CALR3Q96L12 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CALR3Q96L12 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CALR3Q96L12 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.27■■□□□ 1.32
CALR3Q96L12 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
CALR3Q96L12 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CALR3Q96L12 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CALR3Q96L12 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CALR3Q96L12 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CALR3Q96L12 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.27■■□□□ 1.32
CALR3Q96L12 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CALR3Q96L12 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.27■■□□□ 1.32
CALR3Q96L12 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.27■■□□□ 1.32
CALR3Q96L12 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CALR3Q96L12 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.27■■□□□ 1.32
CALR3Q96L12 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CALR3Q96L12 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CALR3Q96L12 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
CALR3Q96L12 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
CALR3Q96L12 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CALR3Q96L12 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CALR3Q96L12 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.26■■□□□ 1.31
CALR3Q96L12 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.26■■□□□ 1.31
CALR3Q96L12 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CALR3Q96L12 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CALR3Q96L12 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CALR3Q96L12 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CALR3Q96L12 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CALR3Q96L12 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CALR3Q96L12 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.25■■□□□ 1.31
CALR3Q96L12 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CALR3Q96L12 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CALR3Q96L12 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CALR3Q96L12 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.25■■□□□ 1.31
CALR3Q96L12 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CALR3Q96L12 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.25■■□□□ 1.31
CALR3Q96L12 LINC01960-201ENST00000563759 1884 ntBASIC23.25■■□□□ 1.31
CALR3Q96L12 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CALR3Q96L12 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CALR3Q96L12 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.24■■□□□ 1.31
CALR3Q96L12 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CALR3Q96L12 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CALR3Q96L12 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.24■■□□□ 1.31
CALR3Q96L12 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms