Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I2Q96KJ9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.28■□□□□ 0.84
COX4I2Q96KJ9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
COX4I2Q96KJ9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I2Q96KJ9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I2Q96KJ9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 AC022616.5-201ENST00000518796 181 ntBASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I2Q96KJ9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.83
COX4I2Q96KJ9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
COX4I2Q96KJ9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I2Q96KJ9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.26■□□□□ 0.83
COX4I2Q96KJ9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.26■□□□□ 0.83
COX4I2Q96KJ9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.26■□□□□ 0.83
COX4I2Q96KJ9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I2Q96KJ9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I2Q96KJ9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I2Q96KJ9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.25■□□□□ 0.83
COX4I2Q96KJ9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 AC242852.2-201ENST00000615738 1807 ntBASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I2Q96KJ9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 AF106564.1-201ENST00000607058 2553 ntBASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 TSPY9P-201ENST00000440215 945 ntBASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 TSPY11P-201ENST00000442607 1045 ntBASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 AC131281.2-201ENST00000520478 145 ntBASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
COX4I2Q96KJ9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 AC007952.6-201ENST00000573168 2673 ntBASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 AC003957.1-201ENST00000625108 2673 ntBASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I2Q96KJ9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.21■□□□□ 0.83
COX4I2Q96KJ9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I2Q96KJ9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.21■□□□□ 0.83
COX4I2Q96KJ9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.21■□□□□ 0.83
COX4I2Q96KJ9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.21■□□□□ 0.83
COX4I2Q96KJ9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I2Q96KJ9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms