Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF183Q96D59 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF183Q96D59 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF183Q96D59 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF183Q96D59 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RNF183Q96D59 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RNF183Q96D59 AC144652.1-201ENST00000609974 1624 ntBASIC16.23■□□□□ 0.19
RNF183Q96D59 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF183Q96D59 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RNF183Q96D59 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF183Q96D59 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF183Q96D59 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF183Q96D59 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF183Q96D59 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF183Q96D59 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF183Q96D59 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RNF183Q96D59 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF183Q96D59 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF183Q96D59 AL499627.2-201ENST00000606283 725 ntBASIC16.23■□□□□ 0.19
RNF183Q96D59 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF183Q96D59 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
RNF183Q96D59 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF183Q96D59 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF183Q96D59 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 LINC01529-204ENST00000636474 1715 ntBASIC16.22■□□□□ 0.19
RNF183Q96D59 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF183Q96D59 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF183Q96D59 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF183Q96D59 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF183Q96D59 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF183Q96D59 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF183Q96D59 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF183Q96D59 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF183Q96D59 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF183Q96D59 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
RNF183Q96D59 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 AC133637.1-201ENST00000624115 1537 ntBASIC16.21■□□□□ 0.19
RNF183Q96D59 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RNF183Q96D59 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF183Q96D59 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
RNF183Q96D59 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
RNF183Q96D59 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF183Q96D59 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF183Q96D59 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RNF183Q96D59 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF183Q96D59 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RNF183Q96D59 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
RNF183Q96D59 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF183Q96D59 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF183Q96D59 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF183Q96D59 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF183Q96D59 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF183Q96D59 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF183Q96D59 AC004812.2-201ENST00000611079 2094 ntBASIC16.19■□□□□ 0.18
RNF183Q96D59 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF183Q96D59 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.19■□□□□ 0.18
RNF183Q96D59 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF183Q96D59 AC126544.1-201ENST00000580842 1059 ntBASIC16.19■□□□□ 0.18
RNF183Q96D59 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF183Q96D59 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RNF183Q96D59 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF183Q96D59 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF183Q96D59 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF183Q96D59 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF183Q96D59 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF183Q96D59 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RNF183Q96D59 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF183Q96D59 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF183Q96D59 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF183Q96D59 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF183Q96D59 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF183Q96D59 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RNF183Q96D59 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF183Q96D59 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms