Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ATP6V0A1Q93050 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 AC004687.1-201ENST00000579003 1625 ntBASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.74■■□□□ 1.55
ATP6V0A1Q93050 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 AC027612.3-201ENST00000413684 1047 ntBASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 MIR6084-201ENST00000622012 110 ntBASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
ATP6V0A1Q93050 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A1Q93050 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 AC012414.1-201ENST00000556676 535 ntBASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A1Q93050 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.7■■□□□ 1.55
ATP6V0A1Q93050 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
ATP6V0A1Q93050 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 AC123595.1-201ENST00000440769 1046 ntBASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 AL354811.1-201ENST00000610286 706 ntBASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A1Q93050 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 KRT18P5-201ENST00000436075 1291 ntBASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 DUX4L2-201ENST00000561772 1275 ntBASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 DUX4L6-201ENST00000626483 1275 ntBASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 DUX4L1-201ENST00000627662 1275 ntBASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 DUX4L8-201ENST00000629013 1275 ntBASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 DUX4L3-201ENST00000630187 1275 ntBASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 DUX4L7-201ENST00000630678 1275 ntBASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 DUX4L5-201ENST00000630834 1275 ntBASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A1Q93050 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
ATP6V0A1Q93050 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6V0A1Q93050 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
ATP6V0A1Q93050 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6V0A1Q93050 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
ATP6V0A1Q93050 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6V0A1Q93050 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6V0A1Q93050 AC022517.1-201ENST00000592429 346 ntBASIC24.68■■□□□ 1.54
ATP6V0A1Q93050 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms