Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 AC099791.2-201ENST00000605725 427 ntBASIC21.49■■□□□ 1.03
ATL1Q8WXF7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATL1Q8WXF7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ATL1Q8WXF7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.46■■□□□ 1.03
ATL1Q8WXF7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 AC004687.1-201ENST00000579003 1625 ntBASIC21.46■■□□□ 1.03
ATL1Q8WXF7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATL1Q8WXF7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 DUX4L19-201ENST00000557448 1267 ntBASIC21.45■■□□□ 1.02
ATL1Q8WXF7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 pRNA.6-201ENST00000610482 90 ntBASIC21.45■■□□□ 1.02
ATL1Q8WXF7 pRNA.5-201ENST00000612139 90 ntBASIC21.45■■□□□ 1.02
ATL1Q8WXF7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 pRNA.11-201ENST00000618423 90 ntBASIC21.45■■□□□ 1.02
ATL1Q8WXF7 pRNA.13-201ENST00000619112 90 ntBASIC21.45■■□□□ 1.02
ATL1Q8WXF7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.45■■□□□ 1.02
ATL1Q8WXF7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 AC006455.2-201ENST00000429931 906 ntBASIC21.44■■□□□ 1.02
ATL1Q8WXF7 AC131281.2-201ENST00000520478 145 ntBASIC21.44■■□□□ 1.02
ATL1Q8WXF7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 MIR4466-201ENST00000606121 54 ntBASIC21.44■■□□□ 1.02
ATL1Q8WXF7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 AC233723.2-201ENST00000623798 2106 ntBASIC21.44■■□□□ 1.02
ATL1Q8WXF7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATL1Q8WXF7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.43■■□□□ 1.02
ATL1Q8WXF7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.43■■□□□ 1.02
ATL1Q8WXF7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms