Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSMEM1Q8WWF3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 RASA4CP-201ENST00000424092 1398 ntBASIC18.16■□□□□ 0.5
SSMEM1Q8WWF3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 AC136469.2-201ENST00000623944 1028 ntBASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSMEM1Q8WWF3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSMEM1Q8WWF3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.14■□□□□ 0.5
SSMEM1Q8WWF3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 RARRES2P6-201ENST00000567333 442 ntBASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SSMEM1Q8WWF3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 CA15P2-201ENST00000611168 834 ntBASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.13■□□□□ 0.49
SSMEM1Q8WWF3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 AL117328.2-201ENST00000624617 1940 ntBASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.12■□□□□ 0.49
SSMEM1Q8WWF3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 AC008764.7-201ENST00000593779 1081 ntBASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SSMEM1Q8WWF3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms