Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC107Q8WV48 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 MIR4281-201ENST00000580852 62 ntBASIC18.98■□□□□ 0.63
CCDC107Q8WV48 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC107Q8WV48 SLC25A24-204ENST00000569674 2357 ntBASIC18.98■□□□□ 0.63
CCDC107Q8WV48 ALDH1A3-203ENST00000557963 1670 ntBASIC18.98■□□□□ 0.63
CCDC107Q8WV48 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC107Q8WV48 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC107Q8WV48 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC107Q8WV48 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC107Q8WV48 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC107Q8WV48 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC107Q8WV48 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC107Q8WV48 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC107Q8WV48 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC107Q8WV48 AF131216.4-201ENST00000638924 1588 ntBASIC18.96■□□□□ 0.63
CCDC107Q8WV48 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
CCDC107Q8WV48 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 C11orf96-202ENST00000528572 1834 ntBASIC18.95■□□□□ 0.62
CCDC107Q8WV48 AC092053.2-201ENST00000640557 1818 ntBASIC18.95■□□□□ 0.62
CCDC107Q8WV48 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC107Q8WV48 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC107Q8WV48 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC107Q8WV48 MIR4508-201ENST00000584178 70 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms