Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00308Q8TCZ7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00308Q8TCZ7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00308Q8TCZ7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00308Q8TCZ7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC00308Q8TCZ7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00308Q8TCZ7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC00308Q8TCZ7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC00308Q8TCZ7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00308Q8TCZ7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LINC00308Q8TCZ7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 AC087742.1-201ENST00000575880 1738 ntBASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00308Q8TCZ7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 AC060814.1-201ENST00000554326 538 ntBASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00308Q8TCZ7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00308Q8TCZ7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00308Q8TCZ7 AL353803.4-201ENST00000565882 1934 ntBASIC14.64□□□□□ -0.07
LINC00308Q8TCZ7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00308Q8TCZ7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LINC00308Q8TCZ7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms