Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
LINC01560Q8TB33 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.22■□□□□ 0.67
LINC01560Q8TB33 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01560Q8TB33 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.22■□□□□ 0.67
LINC01560Q8TB33 LINC01124-201ENST00000409786 2117 ntBASIC19.22■□□□□ 0.67
LINC01560Q8TB33 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01560Q8TB33 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01560Q8TB33 AC004687.1-201ENST00000579003 1625 ntBASIC19.22■□□□□ 0.67
LINC01560Q8TB33 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 AC079630.1-202ENST00000618127 1840 ntBASIC19.21■□□□□ 0.67
LINC01560Q8TB33 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01560Q8TB33 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.2■□□□□ 0.66
LINC01560Q8TB33 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LINC01560Q8TB33 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.19■□□□□ 0.66
LINC01560Q8TB33 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01560Q8TB33 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.19■□□□□ 0.66
LINC01560Q8TB33 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01560Q8TB33 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01560Q8TB33 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.19■□□□□ 0.66
LINC01560Q8TB33 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01560Q8TB33 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LINC01560Q8TB33 AC004812.2-201ENST00000611079 2094 ntBASIC19.17■□□□□ 0.66
LINC01560Q8TB33 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LINC01560Q8TB33 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.17■□□□□ 0.66
LINC01560Q8TB33 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.17■□□□□ 0.66
LINC01560Q8TB33 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.17■□□□□ 0.66
LINC01560Q8TB33 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01560Q8TB33 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LINC01560Q8TB33 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LINC01560Q8TB33 LINC00543-201ENST00000567234 1845 ntBASIC19.16■□□□□ 0.66
LINC01560Q8TB33 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 ID1-201ENST00000376105 1233 ntBASIC19.16■□□□□ 0.66
LINC01560Q8TB33 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LINC01560Q8TB33 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 KRT18P61-201ENST00000585825 1298 ntBASIC19.15■□□□□ 0.66
LINC01560Q8TB33 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01560Q8TB33 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LINC01560Q8TB33 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms