Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PCDH8P1-201ENST00000428983 2773 ntBASIC14.01□□□□□ -0.17
SVIPQ8NHG7 AL162727.3-201ENST00000635661 2787 ntBASIC14.01□□□□□ -0.17
SVIPQ8NHG7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SVIPQ8NHG7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14□□□□□ -0.17
SVIPQ8NHG7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SVIPQ8NHG7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14□□□□□ -0.17
SVIPQ8NHG7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SVIPQ8NHG7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SVIPQ8NHG7 AP000997.3-201ENST00000623333 2250 ntBASIC14□□□□□ -0.17
SVIPQ8NHG7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SVIPQ8NHG7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SVIPQ8NHG7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14□□□□□ -0.17
SVIPQ8NHG7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14□□□□□ -0.17
SVIPQ8NHG7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SVIPQ8NHG7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SVIPQ8NHG7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14□□□□□ -0.17
SVIPQ8NHG7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SVIPQ8NHG7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14□□□□□ -0.17
SVIPQ8NHG7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14□□□□□ -0.17
SVIPQ8NHG7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SVIPQ8NHG7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SVIPQ8NHG7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SVIPQ8NHG7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SVIPQ8NHG7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SVIPQ8NHG7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.96□□□□□ -0.18
SVIPQ8NHG7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SVIPQ8NHG7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SVIPQ8NHG7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SVIPQ8NHG7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms