Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 AC004687.1-201ENST00000579003 1625 ntBASIC25.56■■□□□ 1.68
PRPF38AQ8NAV1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRPF38AQ8NAV1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRPF38AQ8NAV1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.56■■□□□ 1.68
PRPF38AQ8NAV1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.56■■□□□ 1.68
PRPF38AQ8NAV1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.56■■□□□ 1.68
PRPF38AQ8NAV1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PRPF38AQ8NAV1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRPF38AQ8NAV1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 KRT18P5-201ENST00000436075 1291 ntBASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 AC105233.4-201ENST00000642045 216 ntBASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF38AQ8NAV1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF38AQ8NAV1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 CCDC92B-201ENST00000575506 885 ntBASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF38AQ8NAV1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 AC068587.7-201ENST00000641602 218 ntBASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF38AQ8NAV1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 LINC02228-203ENST00000641970 1355 ntBASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF38AQ8NAV1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 TERF1P2-201ENST00000583350 1212 ntBASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 AC022517.1-201ENST00000592429 346 ntBASIC25.5■■□□□ 1.67
PRPF38AQ8NAV1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF38AQ8NAV1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms