Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 GUSBP5-201ENST00000418136 578 ntBASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 KRT16P3-201ENST00000439127 1283 ntBASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 AC087742.1-201ENST00000575880 1738 ntBASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 LINC00526-201ENST00000581067 1875 ntBASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.17■□□□□ 0.82
LSMEM1Q8N8F7 EP400NL-214ENST00000641289 2402 ntBASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 AL117332.1-201ENST00000622628 974 ntBASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LSMEM1Q8N8F7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSMEM1Q8N8F7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LSMEM1Q8N8F7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.14■□□□□ 0.82
LSMEM1Q8N8F7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LSMEM1Q8N8F7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 AL499627.2-201ENST00000606283 725 ntBASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 AC241377.3-202ENST00000626088 1088 ntBASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 AC241585.3-202ENST00000628937 1088 ntBASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 AC245100.8-202ENST00000629247 1058 ntBASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.13■□□□□ 0.81
LSMEM1Q8N8F7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSMEM1Q8N8F7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms