Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH20Q8N6Y1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PCDH20Q8N6Y1 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.52■■□□□ 1.2
PCDH20Q8N6Y1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH20Q8N6Y1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH20Q8N6Y1 ANOS2P-203ENST00000472227 1816 ntBASIC22.52■■□□□ 1.2
PCDH20Q8N6Y1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDH20Q8N6Y1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.52■■□□□ 1.19
PCDH20Q8N6Y1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 AC099791.1-201ENST00000416440 715 ntBASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 CA15P2-201ENST00000611168 834 ntBASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDH20Q8N6Y1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 OR2I1P-207ENST00000453522 948 ntBASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 AC092068.2-201ENST00000590491 1708 ntBASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH20Q8N6Y1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH20Q8N6Y1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH20Q8N6Y1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH20Q8N6Y1 SLC47A1P1-202ENST00000449666 945 ntBASIC22.49■■□□□ 1.19
PCDH20Q8N6Y1 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH20Q8N6Y1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH20Q8N6Y1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH20Q8N6Y1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH20Q8N6Y1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH20Q8N6Y1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
PCDH20Q8N6Y1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH20Q8N6Y1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH20Q8N6Y1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH20Q8N6Y1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH20Q8N6Y1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH20Q8N6Y1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH20Q8N6Y1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PCDH20Q8N6Y1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 AC105265.2-201ENST00000467189 838 ntBASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH20Q8N6Y1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDH20Q8N6Y1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.19
PCDH20Q8N6Y1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.45■■□□□ 1.19
PCDH20Q8N6Y1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDH20Q8N6Y1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH20Q8N6Y1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDH20Q8N6Y1 C9orf163-202ENST00000624034 2573 ntBASIC22.45■■□□□ 1.18
PCDH20Q8N6Y1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH20Q8N6Y1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH20Q8N6Y1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH20Q8N6Y1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH20Q8N6Y1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 ZNRF2P3-201ENST00000424200 374 ntBASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH20Q8N6Y1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 AC126544.1-201ENST00000580842 1059 ntBASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms