Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 AC080038.3-201ENST00000623346 1952 ntBASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01561Q8N1V8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 AC005703.6-201ENST00000623265 1329 ntBASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 DUX4L4-201ENST00000566884 1269 ntBASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 MIR6722-201ENST00000617286 78 ntBASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01561Q8N1V8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01561Q8N1V8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.77□□□□□ -0.04
LINC01561Q8N1V8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01561Q8N1V8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01561Q8N1V8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC01561Q8N1V8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01561Q8N1V8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 PVT1_1.1-201ENST00000615125 194 ntBASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC01561Q8N1V8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 ATP5G2P3-201ENST00000429083 425 ntBASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01561Q8N1V8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 AC137630.3-201ENST00000607245 391 ntBASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01561Q8N1V8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 AC004987.1-201ENST00000428627 508 ntBASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01561Q8N1V8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms