Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIX5Q8N196 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIX5Q8N196 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.68■■□□□ 1.22
SIX5Q8N196 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SIX5Q8N196 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIX5Q8N196 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
SIX5Q8N196 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIX5Q8N196 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
SIX5Q8N196 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SIX5Q8N196 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIX5Q8N196 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SIX5Q8N196 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.68■■□□□ 1.22
SIX5Q8N196 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.68■■□□□ 1.22
SIX5Q8N196 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIX5Q8N196 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIX5Q8N196 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIX5Q8N196 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.68■■□□□ 1.22
SIX5Q8N196 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SIX5Q8N196 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.67■■□□□ 1.22
SIX5Q8N196 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.67■■□□□ 1.22
SIX5Q8N196 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SIX5Q8N196 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SIX5Q8N196 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SIX5Q8N196 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SIX5Q8N196 KRT18P11-201ENST00000435214 1283 ntBASIC22.66■■□□□ 1.22
SIX5Q8N196 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.66■■□□□ 1.22
SIX5Q8N196 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.66■■□□□ 1.22
SIX5Q8N196 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SIX5Q8N196 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SIX5Q8N196 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SIX5Q8N196 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SIX5Q8N196 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SIX5Q8N196 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SIX5Q8N196 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.65■■□□□ 1.22
SIX5Q8N196 BX005040.4-201ENST00000637145 1518 ntBASIC22.65■■□□□ 1.22
SIX5Q8N196 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SIX5Q8N196 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SIX5Q8N196 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SIX5Q8N196 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.64■■□□□ 1.22
SIX5Q8N196 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SIX5Q8N196 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SIX5Q8N196 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SIX5Q8N196 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SIX5Q8N196 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SIX5Q8N196 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.64■■□□□ 1.21
SIX5Q8N196 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.64■■□□□ 1.21
SIX5Q8N196 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SIX5Q8N196 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SIX5Q8N196 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SIX5Q8N196 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SIX5Q8N196 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.63■■□□□ 1.21
SIX5Q8N196 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SIX5Q8N196 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.63■■□□□ 1.21
SIX5Q8N196 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.63■■□□□ 1.21
SIX5Q8N196 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.63■■□□□ 1.21
SIX5Q8N196 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
SIX5Q8N196 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.63■■□□□ 1.21
SIX5Q8N196 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.63■■□□□ 1.21
SIX5Q8N196 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SIX5Q8N196 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.62■■□□□ 1.21
SIX5Q8N196 AC142086.2-201ENST00000569753 217 ntBASIC22.62■■□□□ 1.21
SIX5Q8N196 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 LINC01529-204ENST00000636474 1715 ntBASIC22.62■■□□□ 1.21
SIX5Q8N196 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIX5Q8N196 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.62■■□□□ 1.21
SIX5Q8N196 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SIX5Q8N196 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SIX5Q8N196 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SIX5Q8N196 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SIX5Q8N196 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.61■■□□□ 1.21
SIX5Q8N196 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SIX5Q8N196 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SIX5Q8N196 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.61■■□□□ 1.21
SIX5Q8N196 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.61■■□□□ 1.21
SIX5Q8N196 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SIX5Q8N196 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIX5Q8N196 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIX5Q8N196 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIX5Q8N196 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIX5Q8N196 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIX5Q8N196 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIX5Q8N196 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
SIX5Q8N196 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.6■■□□□ 1.21
SIX5Q8N196 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.6■■□□□ 1.21
SIX5Q8N196 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.6■■□□□ 1.21
SIX5Q8N196 KRT18P6-201ENST00000555540 1265 ntBASIC22.6■■□□□ 1.21
SIX5Q8N196 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.6■■□□□ 1.21
SIX5Q8N196 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.6■■□□□ 1.21
SIX5Q8N196 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SIX5Q8N196 DUSP8P4-201ENST00000399538 1761 ntBASIC22.6■■□□□ 1.21
SIX5Q8N196 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SIX5Q8N196 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms