Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NPAS4Q8IUM7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPAS4Q8IUM7 AC006015.1-201ENST00000429970 570 ntBASIC23.91■■□□□ 1.42
NPAS4Q8IUM7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.91■■□□□ 1.42
NPAS4Q8IUM7 AC068587.7-201ENST00000641602 218 ntBASIC23.91■■□□□ 1.42
NPAS4Q8IUM7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPAS4Q8IUM7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPAS4Q8IUM7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPAS4Q8IUM7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NPAS4Q8IUM7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NPAS4Q8IUM7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NPAS4Q8IUM7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
NPAS4Q8IUM7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.89■■□□□ 1.41
NPAS4Q8IUM7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
NPAS4Q8IUM7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 AC080038.1-201ENST00000611274 1154 ntBASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 AC004687.1-201ENST00000579003 1625 ntBASIC23.88■■□□□ 1.41
NPAS4Q8IUM7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 AC016769.1-201ENST00000409132 1010 ntBASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 AC137761.2-201ENST00000561729 223 ntBASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 AC145350.3-201ENST00000569033 163 ntBASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPAS4Q8IUM7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 BX005040.4-201ENST00000637145 1518 ntBASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 AC020928.2-201ENST00000588717 2197 ntBASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 AC079630.1-202ENST00000618127 1840 ntBASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPAS4Q8IUM7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 LINC00543-201ENST00000567234 1845 ntBASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPAS4Q8IUM7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 AP004607.4-201ENST00000530158 1459 ntBASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 AC087239.1-201ENST00000622671 572 ntBASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPAS4Q8IUM7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 HLA-L-209ENST00000420110 1011 ntBASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 AC010141.3-201ENST00000456659 717 ntBASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NPAS4Q8IUM7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms