Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LRRTM4Q86VH4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRTM4Q86VH4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.69■■□□□ 1.06
LRRTM4Q86VH4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LRRTM4Q86VH4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.68■■□□□ 1.06
LRRTM4Q86VH4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.67■■□□□ 1.06
LRRTM4Q86VH4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 ZNRF2P3-201ENST00000424200 374 ntBASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM4Q86VH4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 IGHV3-19-201ENST00000521488 291 ntBASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 AP005435.1-201ENST00000529293 1178 ntBASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LRRTM4Q86VH4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
LRRTM4Q86VH4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.64■■□□□ 1.06
LRRTM4Q86VH4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRTM4Q86VH4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRTM4Q86VH4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.64■■□□□ 1.05
LRRTM4Q86VH4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.64■■□□□ 1.05
LRRTM4Q86VH4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.64■■□□□ 1.05
LRRTM4Q86VH4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
LRRTM4Q86VH4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
LRRTM4Q86VH4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 TSPY26P-201ENST00000476365 1326 ntBASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 AC068587.7-201ENST00000641602 218 ntBASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 DUSP8P5-201ENST00000422884 1815 ntBASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LRRTM4Q86VH4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRTM4Q86VH4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms