Protein–RNA interactions for Protein: Q7Z4N2

TRPM1, Transient receptor potential cation channel subfamily M member 1, humanhuman

Predictions only

Length 1,603 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1Q7Z4N2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TRPM1Q7Z4N2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRPM1Q7Z4N2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
TRPM1Q7Z4N2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TRPM1Q7Z4N2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TRPM1Q7Z4N2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRPM1Q7Z4N2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRPM1Q7Z4N2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
TRPM1Q7Z4N2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.28■■■□□ 2.6
TRPM1Q7Z4N2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRPM1Q7Z4N2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRPM1Q7Z4N2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC31.27■■■□□ 2.6
TRPM1Q7Z4N2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
TRPM1Q7Z4N2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
TRPM1Q7Z4N2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
TRPM1Q7Z4N2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.6
TRPM1Q7Z4N2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
TRPM1Q7Z4N2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
TRPM1Q7Z4N2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TRPM1Q7Z4N2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
TRPM1Q7Z4N2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC31.26■■■□□ 2.59
TRPM1Q7Z4N2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC31.26■■■□□ 2.59
TRPM1Q7Z4N2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
TRPM1Q7Z4N2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRPM1Q7Z4N2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC31.25■■■□□ 2.59
TRPM1Q7Z4N2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.25■■■□□ 2.59
TRPM1Q7Z4N2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRPM1Q7Z4N2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRPM1Q7Z4N2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRPM1Q7Z4N2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
TRPM1Q7Z4N2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC31.23■■■□□ 2.59
TRPM1Q7Z4N2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TRPM1Q7Z4N2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
TRPM1Q7Z4N2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TRPM1Q7Z4N2 AC097381.1-201ENST00000429019 1296 ntBASIC31.23■■■□□ 2.59
TRPM1Q7Z4N2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.23■■■□□ 2.59
TRPM1Q7Z4N2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC31.23■■■□□ 2.59
TRPM1Q7Z4N2 NFE2L3P1-201ENST00000588207 1959 ntBASIC31.22■■■□□ 2.59
TRPM1Q7Z4N2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC31.22■■■□□ 2.59
TRPM1Q7Z4N2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC31.21■■■□□ 2.59
TRPM1Q7Z4N2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC31.21■■■□□ 2.59
TRPM1Q7Z4N2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC31.21■■■□□ 2.59
TRPM1Q7Z4N2 MIR6821-201ENST00000617625 74 ntBASIC31.21■■■□□ 2.59
TRPM1Q7Z4N2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC31.2■■■□□ 2.59
TRPM1Q7Z4N2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
TRPM1Q7Z4N2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
TRPM1Q7Z4N2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
TRPM1Q7Z4N2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TRPM1Q7Z4N2 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.2■■■□□ 2.58
TRPM1Q7Z4N2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TRPM1Q7Z4N2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC31.19■■■□□ 2.58
TRPM1Q7Z4N2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 AC087623.3-201ENST00000607047 1098 ntBASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 AL354811.1-201ENST00000610286 706 ntBASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 MIR6084-201ENST00000622012 110 ntBASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 AC068587.7-201ENST00000641602 218 ntBASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 LINC01960-201ENST00000563759 1884 ntBASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRPM1Q7Z4N2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 AL358852.1-201ENST00000623174 1268 ntBASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
TRPM1Q7Z4N2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
TRPM1Q7Z4N2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms