Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 HLA-L-211ENST00000482052 1765 ntBASIC18.86■□□□□ 0.61
CSMD2Q7Z408 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.86■□□□□ 0.61
CSMD2Q7Z408 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 KRT18P29-201ENST00000397031 1267 ntBASIC18.85■□□□□ 0.61
CSMD2Q7Z408 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 AC005181.1-201ENST00000604782 1256 ntBASIC18.85■□□□□ 0.61
CSMD2Q7Z408 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 AC092803.2-201ENST00000564287 1899 ntBASIC18.85■□□□□ 0.61
CSMD2Q7Z408 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD2Q7Z408 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 DUX4L16-201ENST00000555130 1264 ntBASIC18.84■□□□□ 0.61
CSMD2Q7Z408 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 AC141586.4-201ENST00000624558 1573 ntBASIC18.84■□□□□ 0.61
CSMD2Q7Z408 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD2Q7Z408 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.83■□□□□ 0.61
CSMD2Q7Z408 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CSMD2Q7Z408 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.83■□□□□ 0.61
CSMD2Q7Z408 AL121832.2-201ENST00000610979 668 ntBASIC18.83■□□□□ 0.61
CSMD2Q7Z408 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 SMUG1P1-201ENST00000590640 811 ntBASIC18.83■□□□□ 0.6
CSMD2Q7Z408 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSMD2Q7Z408 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 CNN2P6-201ENST00000439038 900 ntBASIC18.82■□□□□ 0.6
CSMD2Q7Z408 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.82■□□□□ 0.6
CSMD2Q7Z408 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 SLC29A4P1-201ENST00000398760 971 ntBASIC18.81■□□□□ 0.6
CSMD2Q7Z408 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD2Q7Z408 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.8■□□□□ 0.6
CSMD2Q7Z408 AC092118.2-201ENST00000613495 667 ntBASIC18.8■□□□□ 0.6
CSMD2Q7Z408 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms