Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.77■□□□□ 0.76
NHLRC1Q6VVB1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NHLRC1Q6VVB1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NHLRC1Q6VVB1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.77■□□□□ 0.76
NHLRC1Q6VVB1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NHLRC1Q6VVB1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NHLRC1Q6VVB1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NHLRC1Q6VVB1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 AC241377.3-202ENST00000626088 1088 ntBASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 AC241585.3-202ENST00000628937 1088 ntBASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 AC245100.8-202ENST00000629247 1058 ntBASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 LINC00565-201ENST00000562710 2331 ntBASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NHLRC1Q6VVB1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 EP400NL-214ENST00000641289 2402 ntBASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NHLRC1Q6VVB1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NHLRC1Q6VVB1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 AC006455.2-201ENST00000429931 906 ntBASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 AC009086.3-201ENST00000623486 1008 ntBASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NHLRC1Q6VVB1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 AC131281.2-201ENST00000520478 145 ntBASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 AC099791.2-201ENST00000605725 427 ntBASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NHLRC1Q6VVB1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms