Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 AC120024.1-201ENST00000562672 995 ntBASIC21.13■□□□□ 0.97
RNF220Q5VTB9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF220Q5VTB9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF220Q5VTB9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 KRT18P24-201ENST00000344739 1156 ntBASIC21.11■□□□□ 0.97
RNF220Q5VTB9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 AC010980.1-201ENST00000587192 1142 ntBASIC21.11■□□□□ 0.97
RNF220Q5VTB9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF220Q5VTB9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 AC131274.2-201ENST00000580697 1507 ntBASIC21.1■□□□□ 0.97
RNF220Q5VTB9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 AC007952.6-201ENST00000573168 2673 ntBASIC21.1■□□□□ 0.97
RNF220Q5VTB9 AC003957.1-201ENST00000625108 2673 ntBASIC21.1■□□□□ 0.97
RNF220Q5VTB9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF220Q5VTB9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RNF220Q5VTB9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RNF220Q5VTB9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF220Q5VTB9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 THA1P-201ENST00000590384 1145 ntBASIC21.08■□□□□ 0.97
RNF220Q5VTB9 AC092068.2-201ENST00000590491 1708 ntBASIC21.08■□□□□ 0.97
RNF220Q5VTB9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF220Q5VTB9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF220Q5VTB9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF220Q5VTB9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 MIR4508-201ENST00000584178 70 ntBASIC21.07■□□□□ 0.96
RNF220Q5VTB9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF220Q5VTB9 AF106564.1-201ENST00000607058 2553 ntBASIC21.06■□□□□ 0.96
RNF220Q5VTB9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF220Q5VTB9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms